Z. japonica Nagirizaki
Zjn_sc00018.1.g02150.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G58080.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 107 237 3e-45 172.7 39.9 45.8
Subject 411 240 410
Annot | Symbols: ATATP-PRT1, HISN1A, ATP-PRT1 | ATP phosphoribosyl transferase 1 | chr1:21504562-21507429 REVERSE LENGTH=411
NR ref|XP_004957160.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 107 237 1e-56 168.5 49.2 54.2
Subject 401 230 400
Annot PREDICTED: ATP phosphoribosyltransferase, chloroplastic-like [Setaria italica]
IRGSP Os03t0134300-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 107 237 2e-57 169.7 47.1 52.5
Subject 404 233 403
Annot
Sbicolor Sobic.002G244500.2.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 107 237 6e-61 150 50.4 54.2
Subject 357 186 356
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g02150.1.sm.mkhc length: 238 aa.
IPR001348 ATP phosphoribosyltransferase HisG
method AccNumber shortName E-value location
Biological Process GO:0000105 histidine biosynthetic process    
Molecular Function GO:0003879 ATP phosphoribosyltransferase activity    
HMMPanther PTHR21403 ATP 1.3e-25 107-238
IPR013820 ATP phosphoribosyltransferase, catalytic domain
Biological Process GO:0000105 histidine biosynthetic process    
Molecular Function GO:0003879 ATP phosphoribosyltransferase activity    
Cellular Component GO:0005737 cytoplasm    
HMMPfam PF01634 HisG 5.5e-16 106-172
no_ID  
Gene3D G3DSA:3.40.190.10 no description 3.9e-10 69-109
110-137
Seg seg seg NA 1-12
17-26
32-64
superfamily SSF53850 Periplasmic 7.9e-22 68-176
Pseudomolecule
Chromosome Start End Strand
201197185611977486+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker exon 919659 919814 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:7
Zjn_sc00018.1 maker exon 919904 920012 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:6
Zjn_sc00018.1 maker exon 922111 922191 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:5
Zjn_sc00018.1 maker exon 922278 922391 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:4
Zjn_sc00018.1 maker exon 922505 922606 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:3
Zjn_sc00018.1 maker exon 924863 924922 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:2
Zjn_sc00018.1 maker exon 925026 925289 . - . ID=Zjn_sc00018.1.g02150.1.sm.mkhc:exon:1

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