Z. japonica Nagirizaki
Zjn_sc00018.1.g01820.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G44480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 140 636 e-132 74.8 32.7 45.6
Subject 517 37 503
Annot | Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517
NR ref|XP_004957194.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 107 638 0.0 74 56.6 63.7
Subject 511 1 501
Annot PREDICTED: beta-glucosidase 29-like [Setaria italica]
IRGSP Os09t0490400-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 107 637 0.0 71.5 51.4 58.2
Subject 494 4 485
Annot
Sbicolor Sobic.002G247600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 691 133 639 0.0 73.1 54 59.5
Subject 505 24 501
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g01820.1.am.mk length: 691 aa.
IPR001360 Glycoside hydrolase, family 1
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00131 GLHYDRLASE1 5e-19 470-484
546-554
569-580
590-607
614-626
HMMPanther PTHR10353 GLYCOSYL 3.5e-244 119-636
HMMPfam PF00232 Glyco_hydro_1 7.8e-87 141-276
311-639
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 8e-179 309-641
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 8.8e-153 131-642
IPR018120 Glycoside hydrolase, family 1, active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS00572 GLYCOSYL_HYDROL_F1_1 NA 546-554
PatternScan PS00653 GLYCOSYL_HYDROL_F1_2 NA 147-161
no_ID  
Seg seg seg NA 34-39
103-117
120-129
Pseudomolecule
Chromosome Start End Strand
201207510012079751+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker_non_over exon 817394 817553 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:9
Zjn_sc00018.1 maker_non_over exon 819103 819364 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:8
Zjn_sc00018.1 maker_non_over exon 819471 820391 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:7
Zjn_sc00018.1 maker_non_over exon 820481 820558 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:6
Zjn_sc00018.1 maker_non_over exon 820638 820713 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:5
Zjn_sc00018.1 maker_non_over exon 820979 821086 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:4
Zjn_sc00018.1 maker_non_over exon 821172 821428 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:3
Zjn_sc00018.1 maker_non_over exon 821745 821916 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:2
Zjn_sc00018.1 maker_non_over exon 822004 822045 . - . ID=Zjn_sc00018.1.g01820.1.am.mk:exon:1

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