Z. japonica Nagirizaki
Zjn_sc00018.1.g00040.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G18910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 287 47 281 1e-77 102.4 49.1 62.7
Subject 294 44 280
Annot | Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294
NR ref|XP_004967095.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 287 1 287 e-114 99.7 77 84
Subject 286 1 285
Annot PREDICTED: aquaporin NIP1-4-like [Setaria italica]
IRGSP Os06t0552700-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 287 1 272 5e-94 95.1 67.2 75.6
Subject 273 1 268
Annot
Sbicolor Sobic.010G164100.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 287 1 287 e-111 101.4 74.9 82.9
Subject 291 1 291
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00018.1.g00040.1.sm.mk length: 287 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 4.2e-40 55-74
93-117
181-199
212-234
249-269
HMMPanther PTHR19139 AQUAPORIN 1.4e-118 1-282
HMMPfam PF00230 MIP 8.2e-54 50-266
HMMTigr TIGR00861 MIP: 2.3e-52 59-266
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 111-119
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 3e-64 50-275
superfamily SSF81338 Aquaporin-like 3.2e-58 44-286
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 1.4e-118 1-282
Seg seg seg NA 27-44
257-265
Pseudomolecule
Chromosome Start End Strand
201288624612887541+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00018.1 maker_non_over exon 9604 9799 . - . ID=Zjn_sc00018.1.g00040.1.sm.mk:exon:5
Zjn_sc00018.1 maker_non_over exon 9885 9946 . - . ID=Zjn_sc00018.1.g00040.1.sm.mk:exon:4
Zjn_sc00018.1 maker_non_over exon 10044 10241 . - . ID=Zjn_sc00018.1.g00040.1.sm.mk:exon:3
Zjn_sc00018.1 maker_non_over exon 10340 10579 . - . ID=Zjn_sc00018.1.g00040.1.sm.mk:exon:2
Zjn_sc00018.1 maker_non_over exon 10732 10899 . - . ID=Zjn_sc00018.1.g00040.1.sm.mk:exon:1

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