Z. japonica Nagirizaki
Zjn_sc00017.1.g05600.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G30490.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 700 129 620 e-180 72.1 43.1 53.9
Subject 505 12 502
Annot | Symbols: ATC4H, C4H, CYP73A5, REF3 | cinnamate-4-hydroxylase | chr2:12993861-12995683 REVERSE LENGTH=505
NR ref|NP_001046819.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 700 93 623 0.0 76.1 64.9 67.4
Subject 533 7 533
Annot Os02g0467600 [Oryza sativa Japonica Group] gi|47497518|dbj|BAD19571.1| putative cinnamate 4-hydroxylase [Oryza sativa Japonica Group] gi|113536350|dbj|BAF08733.1| Os02g0467600 [Oryza sativa Japonica Group]
IRGSP Os02t0467600-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 700 93 623 0.0 76.1 64.9 67.4
Subject 533 7 533
Annot
Sbicolor Sobic.004G141200.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 700 101 623 0.0 75.7 64.6 67.4
Subject 530 15 530
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00017.1.g05600.1.am.mk length: 700 aa.
IPR001128 Cytochrome P450
method AccNumber shortName E-value location
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0009055 electron carrier activity    
Molecular Function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen    
Molecular Function GO:0020037 heme binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00385 P450 7.9e-08 421-438
474-485
556-565
Gene3D G3DSA:1.10.630.10 no description 2.6e-113 147-616
HMMPfam PF00067 p450 4.3e-108 149-615
superfamily SSF48264 Cytochrome 9.6e-118 149-620
IPR002401 Cytochrome P450, E-class, group I
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen    
Molecular Function GO:0020037 heme binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00463 EP450I 2.3e-52 177-196
201-222
296-314
410-427
430-456
473-491
514-538
555-565
565-588
IPR017972 Cytochrome P450, conserved site
Molecular Function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00086 CYTOCHROME_P450 NA 558-567
no_ID  
HMMPanther PTHR24298 FAMILY 8.7e-91 105-604
Seg seg seg NA 61-67
120-138
148-157
183-196
270-292
568-578
620-634
658-684
Pseudomolecule
Chromosome Start End Strand
81332627813331622+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00017.1 maker_non_over exon 2630481 2630715 . - . ID=Zjn_sc00017.1.g05600.1.am.mk:exon:4
Zjn_sc00017.1 maker_non_over exon 2631765 2633361 . - . ID=Zjn_sc00017.1.g05600.1.am.mk:exon:3
Zjn_sc00017.1 maker_non_over exon 2633463 2633664 . - . ID=Zjn_sc00017.1.g05600.1.am.mk:exon:2
Zjn_sc00017.1 maker_non_over exon 2635757 2635825 . - . ID=Zjn_sc00017.1.g05600.1.am.mk:exon:1

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