Z. japonica Nagirizaki
Zjn_sc00017.1.g04010.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G27450.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
6 |
298 |
e-144 |
99.7 |
78.3 |
86.7 |
| Subject |
299 |
5 |
297 |
|
| Annot |
| Symbols: NLP1, ATNLP1, CPA | nitrilase-like protein 1 | chr2:11737666-11739577 REVERSE LENGTH=299 |
| NR |
gb|EAY86155.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
1 |
300 |
e-166 |
100.3 |
93.7 |
96.7 |
| Subject |
301 |
1 |
300 |
|
| Annot |
hypothetical protein OsI_07530 [Oryza sativa Indica Group] |
| IRGSP |
Os02t0533900-02_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
1 |
300 |
e-168 |
100.3 |
93.3 |
96.3 |
| Subject |
301 |
1 |
300 |
|
| Annot |
|
| Sbicolor |
Sobic.004G166500.1.p|Chr04|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
300 |
4 |
300 |
e-167 |
99.3 |
92 |
96 |
| Subject |
298 |
2 |
298 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00017.1.g04010.1.sm.mkhc |
length: 300 aa. |
| IPR003010 |
Carbon-nitrogen hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006807 |
nitrogen compound metabolic process |
|
|
| Molecular Function |
GO:0016810 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
|
|
| Gene3D |
G3DSA:3.60.110.10 |
no description |
4.2e-93 |
9-294 |
| HMMPfam |
PF00795 |
CN_hydrolase |
1.3e-31 |
13-185 |
| ProfileScan |
PS50263 |
CN_HYDROLASE |
46.826 |
9-291 |
| superfamily |
SSF56317 |
Carbon-nitrogen |
5.1e-75 |
8-296 |
| IPR017755 |
N-carbamoylputrescine amidase |
| Biological Process |
GO:0006596 |
polyamine biosynthetic process |
|
|
| Molecular Function |
GO:0050126 |
N-carbamoylputrescine amidase activity |
|
|
| HMMTigr |
TIGR03381 |
agmatine_aguB: |
4.6e-140 |
11-292 |
| no_ID |
|
| HMMPanther |
PTHR23088 |
NITRILASE-RELATED |
2.3e-93 |
8-294 |
| HMMPanther |
PTHR23088:SF0 |
SUBFAMILY |
2.3e-93 |
8-294 |
| Seg |
seg |
seg |
NA |
3-16 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 8 | 14142145 | 14144458 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00017.1 |
maker |
exon |
1817645 |
1817850 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:10 |
| Zjn_sc00017.1 |
maker |
exon |
1817902 |
1818075 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:9 |
| Zjn_sc00017.1 |
maker |
exon |
1818149 |
1818245 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:8 |
| Zjn_sc00017.1 |
maker |
exon |
1818389 |
1818555 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:7 |
| Zjn_sc00017.1 |
maker |
exon |
1818644 |
1818677 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:6 |
| Zjn_sc00017.1 |
maker |
exon |
1818761 |
1818807 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:5 |
| Zjn_sc00017.1 |
maker |
exon |
1818886 |
1819037 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:4 |
| Zjn_sc00017.1 |
maker |
exon |
1819152 |
1819243 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:3 |
| Zjn_sc00017.1 |
maker |
exon |
1819377 |
1819425 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:2 |
| Zjn_sc00017.1 |
maker |
exon |
1819839 |
1819958 |
. |
- |
. |
ID=Zjn_sc00017.1.g04010.1.sm.mkhc:exon:1 |