Z. japonica Nagirizaki
Zjn_sc00017.1.g03690.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G21200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 628 97 432 2e-62 70.5 24 34.6
Subject 443 82 439
Annot | Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443
NR ref|XP_004952693.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 628 40 440 e-144 64 47.3 53.5
Subject 402 1 400
Annot PREDICTED: uncharacterized protein LOC101766818 [Setaria italica] gi|514713180|ref|XP_004952694.1| PREDICTED: uncharacterized protein LOC101766818 [Setaria italica]
IRGSP Os02t0542400-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 628 40 440 e-124 65.3 41.1 48.1
Subject 410 1 406
Annot
Sbicolor Sobic.004G170700.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 628 40 440 e-137 65.1 44.7 51.4
Subject 409 1 408
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00017.1.g03690.1.am.mk length: 628 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 399-436
HMMPanther PTHR31292 FAMILY 3.1e-129 16-445
HMMPfam PF13837 Myb_DNA-bind_4 1.1e-19 128-253
Seg seg seg NA 15-27
301-308
418-434
488-498
606-616
Pseudomolecule
Chromosome Start End Strand
81431170314315092+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00017.1 maker_non_over exon 1647011 1647181 . - . ID=Zjn_sc00017.1.g03690.1.am.mk:exon:5
Zjn_sc00017.1 maker_non_over exon 1647372 1647574 . - . ID=Zjn_sc00017.1.g03690.1.am.mk:exon:4
Zjn_sc00017.1 maker_non_over exon 1647683 1647892 . - . ID=Zjn_sc00017.1.g03690.1.am.mk:exon:3
Zjn_sc00017.1 maker_non_over exon 1648884 1650097 . - . ID=Zjn_sc00017.1.g03690.1.am.mk:exon:2
Zjn_sc00017.1 maker_non_over exon 1650312 1650400 . - . ID=Zjn_sc00017.1.g03690.1.am.mk:exon:1

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