Z. japonica Nagirizaki
Zjn_sc00017.1.g02980.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G57580.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 46 519 e-153 123.7 54.3 68.6
Subject 647 129 637
Annot | Symbols: | Calmodulin-binding protein | chr5:23314994-23317683 REVERSE LENGTH=647
NR ref|XP_004952753.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 55 523 0.0 124.1 78.8 83.2
Subject 649 140 649
Annot PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Setaria italica] gi|514713411|ref|XP_004952754.1| PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Setaria italica]
IRGSP Os02t0562300-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 55 523 0.0 124.7 75.3 80.9
Subject 652 143 652
Annot
Sbicolor Sobic.004G181600.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 523 55 523 0.0 124.3 78 83.6
Subject 650 140 650
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00017.1.g02980.1.am.mkhc length: 523 aa.
IPR012416 Calmodulin binding protein-like
method AccNumber shortName E-value location
HMMPfam PF07887 Calmodulin_bind 2.4e-110 54-293
no_ID  
HMMPanther PTHR31713 FAMILY 3.4e-154 55-523
HMMPanther PTHR31713:SF0 SUBFAMILY 3.4e-154 55-523
Seg seg seg NA 74-85
205-216
Pseudomolecule
Chromosome Start End Strand
81467568614680350+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00017.1 maker exon 1281753 1282630 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:6
Zjn_sc00017.1 maker exon 1283333 1283465 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:5
Zjn_sc00017.1 maker exon 1284144 1284347 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:4
Zjn_sc00017.1 maker exon 1284428 1284588 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:3
Zjn_sc00017.1 maker exon 1284691 1285017 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:2
Zjn_sc00017.1 maker exon 1286255 1286417 . - . ID=Zjn_sc00017.1.g02980.1.am.mkhc:exon:1

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