Z. japonica Nagirizaki
Zjn_sc00017.1.g02700.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G77810.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
340 |
13 |
322 |
e-131 |
112.9 |
66.5 |
76.5 |
| Subject |
384 |
8 |
335 |
|
| Annot |
| Symbols: | Galactosyltransferase family protein | chr1:29260899-29263001 REVERSE LENGTH=384 |
| NR |
ref|XP_004952712.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
340 |
6 |
322 |
e-172 |
117.1 |
86.8 |
90.3 |
| Subject |
398 |
3 |
349 |
|
| Annot |
PREDICTED: beta-1,3-galactosyltransferase 7-like [Setaria italica] |
| IRGSP |
Os02t0566800-01_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
340 |
26 |
322 |
e-154 |
114.4 |
77.9 |
82.6 |
| Subject |
389 |
5 |
340 |
|
| Annot |
|
| Sbicolor |
Sobic.004G185900.1.p|Chr04|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
340 |
12 |
322 |
e-170 |
152.4 |
84.4 |
89.7 |
| Subject |
518 |
129 |
469 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00017.1.g02700.1.am.mkhc |
length: 340 aa. |
| IPR002659 |
Glycosyl transferase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[20-322] |
2.5e-188 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
3e-48 |
116-312 |
| IPR025298 |
Domain of unknown function DUF4094 |
| HMMPfam |
PF13334 |
DUF4094 |
1.5e-15 |
16-82 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF66 |
SUBFAMILY |
2.5e-188 |
20-322 |
| Seg |
seg |
seg |
NA |
128-140 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 8 | 14768416 | 14773649 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00017.1 |
maker |
exon |
1188454 |
1188720 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:1 |
| Zjn_sc00017.1 |
maker |
exon |
1189972 |
1190071 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:2 |
| Zjn_sc00017.1 |
maker |
exon |
1190340 |
1190511 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:3 |
| Zjn_sc00017.1 |
maker |
exon |
1191000 |
1191063 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:4 |
| Zjn_sc00017.1 |
maker |
exon |
1191891 |
1191963 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:5 |
| Zjn_sc00017.1 |
maker |
exon |
1192049 |
1192169 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:6 |
| Zjn_sc00017.1 |
maker |
exon |
1192266 |
1192353 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:7 |
| Zjn_sc00017.1 |
maker |
exon |
1192443 |
1192568 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:8 |
| Zjn_sc00017.1 |
maker |
exon |
1192650 |
1193687 |
. |
+ |
. |
ID=Zjn_sc00017.1.g02700.1.am.mkhc:exon:9 |