Z. japonica Nagirizaki
Zjn_sc00017.1.g00960.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G31810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 631 97 426 e-137 77.8 38.8 45
Subject 491 84 441
Annot | Symbols: | ACT domain-containing small subunit of acetolactate synthase protein | chr2:13524271-13528246 FORWARD LENGTH=491
NR ref|XP_004953051.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 631 1 471 e-167 77.3 53.6 57.8
Subject 488 1 483
Annot PREDICTED: acetolactate synthase small subunit 2, chloroplastic-like [Setaria italica]
IRGSP Os02t0608600-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 631 166 426 e-126 53.9 36.6 39
Subject 340 2 292
Annot
Sbicolor Sobic.004G210000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 631 97 471 e-163 78 48.5 51.7
Subject 492 85 487
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00017.1.g00960.1.sm.mkhc length: 631 aa.
IPR004789 Acetolactate synthase, small subunit
method AccNumber shortName E-value location
Molecular Function GO:0003984 acetolactate synthase activity    
Biological Process GO:0009082 branched-chain amino acid biosynthetic process    
HMMTigr TIGR00119 acolac_sm: 3.1e-38 99-252
304-426
IPR009606 Protein of unknown function DUF1218
HMMPfam PF06749 DUF1218 8.6e-13 544-599
IPR019455 Acetolactate synthase, small subunit, C-terminal
HMMPfam PF10369 ALS_ss_C 3e-09 178-252
385-426
no_ID  
BlastProDom PD002844 Q6K1X7_ORYSA_Q6K1X7; 1e-28 301-378
100-171
Gene3D G3DSA:3.30.70.1150 no description 4.7e-09 178-253
385-426
Gene3D G3DSA:3.30.70.260 no description 1.3e-34 98-172
303-380
HMMPanther PTHR30239 ACETOLACTATE 5.4e-134 97-476
HMMPanther PTHR30239:SF0 ACETOLACTATE 5.4e-134 97-476
HMMPfam PF13710 ACT_5 2.3e-16 109-168
313-375
Seg seg seg NA 46-63
584-595
superfamily SSF55021 ACT-like 5.6e-10 173-258
303-379
94-177
380-426
Pseudomolecule
Chromosome Start End Strand
81557104715589883+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00017.1 maker exon 372220 372733 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:15
Zjn_sc00017.1 maker exon 372943 372958 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:14
Zjn_sc00017.1 maker exon 372983 373058 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:13
Zjn_sc00017.1 maker exon 374510 374683 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:12
Zjn_sc00017.1 maker exon 384111 384170 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:11
Zjn_sc00017.1 maker exon 387774 387803 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:10
Zjn_sc00017.1 maker exon 387852 388004 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:9
Zjn_sc00017.1 maker exon 388083 388205 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:8
Zjn_sc00017.1 maker exon 388283 388387 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:7
Zjn_sc00017.1 maker exon 389057 389212 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:6
Zjn_sc00017.1 maker exon 389303 389386 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:5
Zjn_sc00017.1 maker exon 389476 389544 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:4
Zjn_sc00017.1 maker exon 389637 389720 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:3
Zjn_sc00017.1 maker exon 390500 390713 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:2
Zjn_sc00017.1 maker exon 390770 391056 . - . ID=Zjn_sc00017.1.g00960.1.sm.mkhc:exon:1

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