Z. japonica Nagirizaki
Zjn_sc00016.1.g06870.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G29390.5 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
212 |
98 |
169 |
6e-32 |
103.3 |
26.9 |
30.2 |
| Subject |
219 |
147 |
218 |
|
| Annot |
| Symbols: ATSMO2 | sterol 4-alpha-methyl-oxidase 2-2 | chr2:12610758-12611929 REVERSE LENGTH=219 |
| NR |
ref|XP_004978537.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
212 |
104 |
174 |
4e-36 |
126.4 |
33 |
33.5 |
| Subject |
268 |
197 |
267 |
|
| Annot |
PREDICTED: methylsterol monooxygenase 2-1-like [Setaria italica] |
| IRGSP |
Os11t0707600-02_chr11_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
212 |
104 |
174 |
3e-37 |
125.5 |
31.6 |
33 |
| Subject |
266 |
195 |
265 |
|
| Annot |
|
| Sbicolor |
Sobic.001G518600.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
212 |
104 |
174 |
2e-38 |
126.4 |
32.5 |
33 |
| Subject |
268 |
197 |
267 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00016.1.g06870.1.sm.mkhc |
length: 212 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11863 |
STEROL |
1.1e-40 |
8-174 |
| HMMPanther |
PTHR11863:SF18 |
SUBFAMILY |
1.1e-40 |
8-174 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 9 | 4338814 | 4343074 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00016.1 |
maker |
exon |
3907554 |
3907689 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:1 |
| Zjn_sc00016.1 |
maker |
exon |
3907830 |
3907967 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:2 |
| Zjn_sc00016.1 |
maker |
exon |
3909523 |
3909582 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:3 |
| Zjn_sc00016.1 |
maker |
exon |
3909847 |
3909922 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:4 |
| Zjn_sc00016.1 |
maker |
exon |
3910260 |
3910323 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:5 |
| Zjn_sc00016.1 |
maker |
exon |
3910406 |
3910486 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:6 |
| Zjn_sc00016.1 |
maker |
exon |
3910569 |
3910634 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:7 |
| Zjn_sc00016.1 |
maker |
exon |
3910934 |
3911007 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:8 |
| Zjn_sc00016.1 |
maker |
exon |
3911774 |
3911814 |
. |
+ |
. |
ID=Zjn_sc00016.1.g06870.1.sm.mkhc:exon:9 |