Z. japonica Nagirizaki
Zjn_sc00016.1.g05640.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37330.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 23 267 e-101 102.2 69.3 81.3
Subject 273 18 272
Annot | Symbols: ALS3 | aluminum sensitive 3 | chr2:15669190-15670172 FORWARD LENGTH=273
NR ref|XP_006654935.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 2 267 e-118 106 82.4 90.6
Subject 283 6 283
Annot PREDICTED: UPF0014 membrane protein STAR2-like [Oryza brachyantha]
IRGSP Os05t0119000-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 2 266 e-107 106.7 79.8 88.4
Subject 285 7 283
Annot
Sbicolor Sobic.009G023700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 2 267 e-118 104.1 84.3 91.4
Subject 278 3 278
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g05640.1.am.mk length: 267 aa.
IPR005226 Conserved hypothetical protein CHP00245
method AccNumber shortName E-value location
HMMPfam PF03649 UPF0014 1e-47 34-254
HMMTigr TIGR00245 TIGR00245: 7.9e-51 35-260
no_ID  
HMMPanther PTHR30028 UPF0014 2.1e-93 9-267
HMMPanther PTHR30028:SF0 UPF0014 2.1e-93 9-267
Seg seg seg NA 31-42
135-151
Pseudomolecule
Chromosome Start End Strand
18524459525481-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker_non_over exon 3327974 3328219 . + . ID=Zjn_sc00016.1.g05640.1.am.mk:exon:1
Zjn_sc00016.1 maker_non_over exon 3328348 3328593 . + . ID=Zjn_sc00016.1.g05640.1.am.mk:exon:2
Zjn_sc00016.1 maker_non_over exon 3328685 3328996 . + . ID=Zjn_sc00016.1.g05640.1.am.mk:exon:3

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