Z. japonica Nagirizaki
Zjn_sc00016.1.g05420.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G37090.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
279 |
35 |
270 |
2e-62 |
125.8 |
41.9 |
57.3 |
| Subject |
351 |
134 |
351 |
|
| Annot |
| Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351 |
| NR |
emb|CAI93177.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
279 |
31 |
263 |
e-122 |
133.7 |
76.3 |
78.9 |
| Subject |
373 |
138 |
370 |
|
| Annot |
glycosyltransferase [Saccharum officinarum] |
| IRGSP |
Os05t0123100-01_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
279 |
39 |
279 |
e-117 |
133 |
79.9 |
81.7 |
| Subject |
371 |
131 |
371 |
|
| Annot |
|
| Sbicolor |
Sobic.009G026100.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
279 |
39 |
263 |
e-113 |
134.8 |
75.3 |
77.1 |
| Subject |
376 |
149 |
373 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00016.1.g05420.1.sm.mkhc |
length: 279 aa. |
| IPR005027 |
Glycosyl transferase, family 43 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0015018 |
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR10896 |
GALACTOSYLGALACTOSYLXYLOSYLPROTEIN |
8.1e-113 |
31-258 |
| HMMPfam |
PF03360 |
Glyco_transf_43 |
7.4e-44 |
38-259 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
3.2e-64 |
30-261 |
| HMMPanther |
PTHR10896:SF1 |
BETA-1,3-GLUCURONYLTRANSFERASE |
8.1e-113 |
31-258 |
| Seg |
seg |
seg |
NA |
45-66 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
5.2e-59 |
24-279 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 18 | 623236 | 630099 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00016.1 |
maker |
exon |
3223356 |
3224372 |
. |
- |
. |
ID=Zjn_sc00016.1.g05420.1.sm.mkhc:exon:4 |
| Zjn_sc00016.1 |
maker |
exon |
3225041 |
3225326 |
. |
- |
. |
ID=Zjn_sc00016.1.g05420.1.sm.mkhc:exon:3 |
| Zjn_sc00016.1 |
maker |
exon |
3227732 |
3228032 |
. |
- |
. |
ID=Zjn_sc00016.1.g05420.1.sm.mkhc:exon:2 |
| Zjn_sc00016.1 |
maker |
exon |
3230123 |
3230219 |
. |
- |
. |
ID=Zjn_sc00016.1.g05420.1.sm.mkhc:exon:1 |