Z. japonica Nagirizaki
Zjn_sc00016.1.g05210.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G23100.3 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
481 |
7 |
481 |
0.0 |
108.5 |
76.3 |
84 |
| Subject |
522 |
35 |
522 |
|
| Annot |
| Symbols: GSH1 | glutamate-cysteine ligase | chr4:12103458-12106751 REVERSE LENGTH=522 |
| NR |
gb|EEE62203.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
481 |
1 |
481 |
0.0 |
266.3 |
91.3 |
95.2 |
| Subject |
1281 |
790 |
1281 |
|
| Annot |
hypothetical protein OsJ_16990 [Oryza sativa Japonica Group] |
| IRGSP |
Os05t0129000-01_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
481 |
1 |
481 |
0.0 |
102.3 |
90.2 |
94.2 |
| Subject |
492 |
1 |
492 |
|
| Annot |
|
| Sbicolor |
Sobic.009G029600.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
481 |
1 |
481 |
0.0 |
104.2 |
90.6 |
93.8 |
| Subject |
501 |
1 |
501 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00016.1.g05210.1.sm.mkhc |
length: 481 aa. |
| IPR006336 |
Glutamate--cysteine ligase, GCS2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004357 |
glutamate-cysteine ligase activity |
|
|
| Biological Process |
GO:0042398 |
cellular modified amino acid biosynthetic process |
|
|
| HMMPfam |
PF04107 |
GCS2 |
1.2e-88 |
112-393 |
| IPR011556 |
Glutamate--cysteine ligase, plant |
| Molecular Function |
GO:0004357 |
glutamate-cysteine ligase activity |
|
|
| Biological Process |
GO:0006750 |
glutathione biosynthetic process |
|
|
| HMMTigr |
TIGR01436 |
glu_cys_lig_pln: |
1.1e-220 |
60-481 |
| no_ID |
|
| superfamily |
SSF55931 |
Glutamine |
2.7e-61 |
71-480 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 18 | 718600 | 722809 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00016.1 |
maker |
exon |
3130646 |
3131128 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:15 |
| Zjn_sc00016.1 |
maker |
exon |
3131249 |
3131318 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:14 |
| Zjn_sc00016.1 |
maker |
exon |
3131464 |
3131505 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:13 |
| Zjn_sc00016.1 |
maker |
exon |
3131639 |
3131731 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:12 |
| Zjn_sc00016.1 |
maker |
exon |
3131883 |
3131963 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:11 |
| Zjn_sc00016.1 |
maker |
exon |
3132043 |
3132132 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:10 |
| Zjn_sc00016.1 |
maker |
exon |
3132251 |
3132344 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:9 |
| Zjn_sc00016.1 |
maker |
exon |
3132460 |
3132528 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:8 |
| Zjn_sc00016.1 |
maker |
exon |
3132610 |
3132680 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:7 |
| Zjn_sc00016.1 |
maker |
exon |
3132756 |
3132824 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:6 |
| Zjn_sc00016.1 |
maker |
exon |
3132973 |
3133056 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:5 |
| Zjn_sc00016.1 |
maker |
exon |
3133332 |
3133424 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:4 |
| Zjn_sc00016.1 |
maker |
exon |
3133788 |
3133895 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:3 |
| Zjn_sc00016.1 |
maker |
exon |
3134111 |
3134261 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:2 |
| Zjn_sc00016.1 |
maker |
exon |
3134614 |
3134855 |
. |
- |
. |
ID=Zjn_sc00016.1.g05210.1.sm.mkhc:exon:1 |