Z. japonica Nagirizaki
Zjn_sc00016.1.g05200.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G80600.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
404 |
2 |
403 |
e-164 |
113.1 |
66.8 |
81.9 |
| Subject |
457 |
55 |
457 |
|
| Annot |
| Symbols: WIN1 | HOPW1-1-interacting 1 | chr1:30298675-30300513 REVERSE LENGTH=457 |
| NR |
gb|AAU10748.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
404 |
1 |
404 |
0.0 |
115.1 |
82.9 |
91.6 |
| Subject |
465 |
59 |
462 |
|
| Annot |
putative acetylornithine aminotransferase [Oryza sativa Japonica Group] |
| IRGSP |
Os05t0129100-00_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
404 |
63 |
376 |
e-146 |
80.7 |
61.6 |
68.3 |
| Subject |
326 |
16 |
326 |
|
| Annot |
|
| Sbicolor |
Sobic.009G029700.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
404 |
1 |
403 |
0.0 |
115.3 |
82.2 |
90.1 |
| Subject |
466 |
59 |
462 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00016.1.g05200.1.am.mkhc |
length: 404 aa. |
| IPR004636 |
Transaminase, Acetylornithine/Succinylornithine family |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006525 |
arginine metabolic process |
|
|
| Molecular Function |
GO:0008483 |
transaminase activity |
|
|
| HAMAP |
MF_01107 |
ArgD_aminotrans_3 |
42.711 |
13-400 |
| HMMPanther |
PTHR11986:SF19 |
ACETYLORNITHINE |
9.9e-216 |
1-404 |
| HMMTigr |
TIGR00707 |
argD: |
7.6e-141 |
15-397 |
| IPR005814 |
Aminotransferase class-III |
| Molecular Function |
GO:0008483 |
transaminase activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| HMMPanther |
PTHR11986 |
AMINOTRANSFERASE |
9.9e-216 |
1-404 |
| HMMPfam |
PF00202 |
Aminotran_3 |
1.2e-103 |
27-348 |
| PatternScan |
PS00600 |
AA_TRANSFER_CLASS_3 |
NA |
225-262 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
9.5e-89 |
60-306 |
| IPR015422 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.90.1150.10 |
no description |
1.1e-36 |
308-399 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
5.7e-128 |
1-402 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 18 | 723536 | 725245 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00016.1 |
maker |
exon |
3128210 |
3128921 |
. |
- |
. |
ID=Zjn_sc00016.1.g05200.1.am.mkhc:exon:3 |
| Zjn_sc00016.1 |
maker |
exon |
3129101 |
3129532 |
. |
- |
. |
ID=Zjn_sc00016.1.g05200.1.am.mkhc:exon:2 |
| Zjn_sc00016.1 |
maker |
exon |
3129665 |
3129919 |
. |
- |
. |
ID=Zjn_sc00016.1.g05200.1.am.mkhc:exon:1 |