Z. japonica Nagirizaki
Zjn_sc00016.1.g04970.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_002463965.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
259 |
66 |
259 |
2e-36 |
174.5 |
39 |
46.7 |
| Subject |
452 |
3 |
190 |
|
| Annot |
hypothetical protein SORBIDRAFT_01g009780 [Sorghum bicolor] gi|241917819|gb|EER90963.1| hypothetical protein SORBIDRAFT_01g009780 [Sorghum bicolor] |
| IRGSP |
Os03t0652400-00_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
259 |
66 |
257 |
2e-29 |
97.3 |
34.7 |
41.3 |
| Subject |
252 |
16 |
199 |
|
| Annot |
|
| Sbicolor |
Sobic.001G109500.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
259 |
66 |
259 |
2e-39 |
174.5 |
39 |
46.7 |
| Subject |
452 |
3 |
190 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00016.1.g04970.1.sm.mk |
length: 259 aa. |
| IPR001810 |
F-box domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
6.4e-08 |
68-105 |
| HMMSmart |
SM00256 |
A |
0.00097 |
68-108 |
| ProfileScan |
PS50181 |
FBOX |
8.570 |
62-100 |
| superfamily |
SSF81383 |
F-box |
1.9e-10 |
55-104 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
4.3e-07 |
64-101 |
| Seg |
seg |
seg |
NA |
101-117 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 18 | 864067 | 864846 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00016.1 |
maker_non_over |
exon |
2988609 |
2989388 |
. |
+ |
. |
ID=Zjn_sc00016.1.g04970.1.sm.mk:exon:1 |