Z. japonica Nagirizaki
Zjn_sc00016.1.g04220.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G62980.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 258 1 255 5e-92 230.2 64.7 80.6
Subject 594 322 573
Annot | Symbols: TIR1 | F-box/RNI-like superfamily protein | chr3:23273479-23276181 REVERSE LENGTH=594
NR ref|XP_002440601.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 258 1 258 e-136 229.1 92.6 94.2
Subject 591 334 591
Annot hypothetical protein SORBIDRAFT_09g003870 [Sorghum bicolor] gi|241945886|gb|EES19031.1| hypothetical protein SORBIDRAFT_09g003870 [Sorghum bicolor]
IRGSP Os05t0150500-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 258 1 258 e-134 227.5 90.7 93.4
Subject 587 333 587
Annot
Sbicolor Sobic.009G045300.2.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 258 1 258 e-139 229.1 92.6 94.2
Subject 591 334 591
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g04220.1.am.mkhc length: 258 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 6.8e-19 4-213
HMMPanther PTHR23125 F-BOX/LEUCINE 2.2e-148 1-255
HMMPanther PTHR23125:SF17 GRR1-RELATED, 2.2e-148 1-255
superfamily SSF52047 RNI-like 2.2e-11 2-198
Pseudomolecule
Chromosome Start End Strand
1811843691188062-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker exon 2665393 2665453 . + . ID=Zjn_sc00016.1.g04220.1.am.mkhc:exon:1
Zjn_sc00016.1 maker exon 2666928 2667420 . + . ID=Zjn_sc00016.1.g04220.1.am.mkhc:exon:2
Zjn_sc00016.1 maker exon 2667879 2669086 . + . ID=Zjn_sc00016.1.g04220.1.am.mkhc:exon:3

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