Z. japonica Nagirizaki
Zjn_sc00016.1.g03830.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G48030.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 502 1 502 0.0 101 79.7 90.6
Subject 507 1 507
Annot | Symbols: mtLPD1 | mitochondrial lipoamide dehydrogenase 1 | chr1:17717432-17719141 REVERSE LENGTH=507
NR ref|XP_004977101.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 502 1 502 0.0 99.8 95.2 98.6
Subject 501 1 501
Annot PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial [Setaria italica]
IRGSP Os01t0328700-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 502 1 502 0.0 100.2 90.6 96
Subject 503 1 503
Annot
Sbicolor Sobic.009G054600.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 502 1 502 0.0 99.6 89.8 95.8
Subject 500 1 500
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g03830.1.sm.mkhc length: 502 aa.
IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
method AccNumber shortName E-value location
Biological Process GO:0045454 cell redox homeostasis    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.390.30 no description 5.2e-48 371-500
HMMPfam PF02852 Pyr_redox_dim 5.1e-39 383-491
IPR006258 Dihydrolipoamide dehydrogenase
Molecular Function GO:0004148 dihydrolipoyl dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR22912:SF20 DIHYDROLIPOAMIDE 1.8e-212 1-502
HMMTigr TIGR01350 lipoamide_DH: 1.1e-168 39-502
IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site
Molecular Function GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00076 PYRIDINE_REDOX_1 NA 74-84
IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00368 FADPNR 5.5e-39 41-60
172-190
211-229
300-316
329-351
IPR016156 FAD/NAD-linked reductase, dimerisation domain
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF55424 FAD/NAD-linked 1.9e-41 379-501
IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07992 Pyr_redox_2 7.5e-43 40-351
no_ID  
FPrintScan PR00411 PNDRDTASEI 2.3e-82 40-62
73-88
175-184
211-236
301-315
344-351
379-400
444-459
466-486
Gene3D G3DSA:3.50.50.60 no description 6.6e-53 38-175
176-370
HMMPanther PTHR22912 DISULFIDE 1.8e-212 1-502
Seg seg seg NA 2-34
41-52
superfamily SSF51905 FAD/NAD(P)-binding 5.3e-69 36-358
Pseudomolecule
Chromosome Start End Strand
1814746081479372+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker exon 2374083 2375581 . - . ID=Zjn_sc00016.1.g03830.1.sm.mkhc:exon:2
Zjn_sc00016.1 maker exon 2378590 2378847 . - . ID=Zjn_sc00016.1.g03830.1.sm.mkhc:exon:1

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