Z. japonica Nagirizaki
Zjn_sc00016.1.g03720.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G51840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 17 200 2e-43 208.6 49.3 60.8
Subject 436 23 243
Annot | Symbols: ACX4, ATSCX, ATG6 | acyl-CoA oxidase 4 | chr3:19225653-19229008 REVERSE LENGTH=436
NR ref|XP_003568856.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 2 165 2e-50 209.1 58.9 62.7
Subject 437 6 215
Annot PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal-like [Brachypodium distachyon]
IRGSP Os05t0163700-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 14 165 4e-51 205.7 55 59.8
Subject 430 12 208
Annot
Sbicolor Sobic.009G057300.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 209 14 165 1e-51 207.2 55.5 60.3
Subject 433 15 211
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g03720.1.sm.mkhc length: 209 aa.
IPR006089 Acyl-CoA dehydrogenase, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00073 ACYL_COA_DH_2 NA 152-171
IPR006092 Acyl-CoA dehydrogenase, N-terminal
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02771 Acyl-CoA_dh_N 2.8e-06 57-118
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00441 Acyl-CoA_dh_1 1.8e-05 120-190
superfamily SSF47203 Acyl-CoA 5.6e-12 105-195
IPR009100 Acyl-CoA dehydrogenase/oxidase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56645 Acyl-CoA 3.3e-12 35-136
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.540.10 no description 2.3e-08 51-111
no_ID  
Gene3D G3DSA:1.20.140.10 no description 2.8e-11 112-195
HMMPanther PTHR10909 ELECTRON 1.5e-37 133-196
HMMPanther PTHR10909:SF122PREDICTED: HYPOTHETICAL 1.5e-37 133-196
Seg seg seg NA 5-11
Pseudomolecule
Chromosome Start End Strand
1815341141539060+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker exon 2314395 2315436 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:8
Zjn_sc00016.1 maker exon 2315623 2315715 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:7
Zjn_sc00016.1 maker exon 2316733 2316792 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:6
Zjn_sc00016.1 maker exon 2317124 2317216 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:5
Zjn_sc00016.1 maker exon 2317335 2317412 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:4
Zjn_sc00016.1 maker exon 2317729 2317790 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:3
Zjn_sc00016.1 maker exon 2318998 2319096 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:2
Zjn_sc00016.1 maker exon 2319198 2319341 . - . ID=Zjn_sc00016.1.g03720.1.sm.mkhc:exon:1

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