Z. japonica Nagirizaki
Zjn_sc00016.1.g02420.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G18910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 291 41 290 7e-92 101 56 69.4
Subject 294 47 290
Annot | Symbols: NIP1;2, NLM2, ATNLM2 | NOD26-like intrinsic protein 1;2 | chr4:10366211-10368179 FORWARD LENGTH=294
NR ref|XP_002440774.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 291 1 291 e-137 97.3 86.6 91.4
Subject 283 1 283
Annot hypothetical protein SORBIDRAFT_09g006390 [Sorghum bicolor] gi|241946059|gb|EES19204.1| hypothetical protein SORBIDRAFT_09g006390 [Sorghum bicolor]
IRGSP Os02t0232900-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 291 12 290 4e-99 97.6 64.6 74.9
Subject 284 21 279
Annot
Sbicolor Sobic.009G075900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 291 1 291 e-140 97.3 86.6 91.4
Subject 283 1 283
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g02420.1.am.mk length: 291 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.8e-42 46-65
85-109
122-141
167-185
211-233
248-268
HMMPanther PTHR19139 AQUAPORIN 2.4e-144 34-291
HMMPfam PF00230 MIP 7.2e-56 40-265
HMMTigr TIGR00861 MIP: 1e-52 50-265
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 103-111
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.6e-67 40-274
superfamily SSF81338 Aquaporin-like 4.4e-61 35-282
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 2.4e-144 34-291
Seg seg seg NA 2-21
Pseudomolecule
Chromosome Start End Strand
1821806232183823-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker_non_over exon 1669632 1669772 . + . ID=Zjn_sc00016.1.g02420.1.am.mk:exon:1
Zjn_sc00016.1 maker_non_over exon 1670364 1670588 . + . ID=Zjn_sc00016.1.g02420.1.am.mk:exon:2
Zjn_sc00016.1 maker_non_over exon 1670682 1670918 . + . ID=Zjn_sc00016.1.g02420.1.am.mk:exon:3
Zjn_sc00016.1 maker_non_over exon 1672442 1672503 . + . ID=Zjn_sc00016.1.g02420.1.am.mk:exon:4
Zjn_sc00016.1 maker_non_over exon 1672622 1672832 . + . ID=Zjn_sc00016.1.g02420.1.am.mk:exon:5

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