Z. japonica Nagirizaki
Zjn_sc00016.1.g00560.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G51820.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 133 267 1e-61 144.9 41.9 46.1
Subject 387 253 387
Annot | Symbols: ATG4, G4, CHLG | UbiA prenyltransferase family protein | chr3:19216301-19218934 REVERSE LENGTH=387
NR ref|XP_010104247.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 33 205 1e-78 109.7 57.3 61
Subject 293 39 250
Annot Chlorophyll synthase [Morus notabilis] gi|587911567|gb|EXB99414.1| Chlorophyll synthase [Morus notabilis]
IRGSP Os05t0349700-03_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 133 267 6e-68 66.7 46.8 49.1
Subject 178 44 178
Annot
Sbicolor Sobic.009G104700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 133 267 4e-62 164 47.9 48.3
Subject 438 304 438
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g00560.1.sm.mkhc length: 267 aa.
IPR000537 UbiA prenyltransferase family
method AccNumber shortName E-value location
Molecular Function GO:0004659 prenyltransferase activity    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF01040 UbiA 2.4e-10 98-126
137-246
no_ID  
HMMPanther PTHR11048 PRENYLTRANSFERASES 3e-109 8-267
HMMPanther PTHR11048:SF11 UBIA 3e-109 8-267
Seg seg seg NA 15-37
Pseudomolecule
Chromosome Start End Strand
1833641163385069+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker exon 468386 468986 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:12
Zjn_sc00016.1 maker exon 469111 469158 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:11
Zjn_sc00016.1 maker exon 469483 469559 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:10
Zjn_sc00016.1 maker exon 483212 483293 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:9
Zjn_sc00016.1 maker exon 483370 483432 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:8
Zjn_sc00016.1 maker exon 483523 483598 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:7
Zjn_sc00016.1 maker exon 483871 483884 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:6
Zjn_sc00016.1 maker exon 485392 485478 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:5
Zjn_sc00016.1 maker exon 485628 485668 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:4
Zjn_sc00016.1 maker exon 486638 486725 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:3
Zjn_sc00016.1 maker exon 489053 489147 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:2
Zjn_sc00016.1 maker exon 489270 489339 . - . ID=Zjn_sc00016.1.g00560.1.sm.mkhc:exon:1

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