Z. japonica Nagirizaki
Zjn_sc00016.1.g00240.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G31860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 270 64 255 4e-70 104.1 50 58.9
Subject 281 50 272
Annot | Symbols: AT-IE, HISN2 | histidine biosynthesis bifunctional protein (HISIE) | chr1:11434250-11436530 REVERSE LENGTH=281
NR ref|XP_002443519.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 270 1 255 e-105 113.3 78.1 84.8
Subject 306 1 296
Annot hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor] gi|241944212|gb|EES17357.1| hypothetical protein SORBIDRAFT_08g020870 [Sorghum bicolor]
IRGSP Os01t0276500-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 270 33 257 1e-93 113.3 64.8 72.6
Subject 306 47 298
Annot
Sbicolor Sobic.008G162100.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 270 1 255 e-108 113.3 78.1 84.8
Subject 306 1 296
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00016.1.g00240.1.sm.mkhc length: 270 aa.
IPR002496 Phosphoribosyl-AMP cyclohydrolase domain
method AccNumber shortName E-value location
Biological Process GO:0000105 histidine biosynthetic process    
Molecular Function GO:0004635 phosphoribosyl-AMP cyclohydrolase activity    
BlastProDom PD002610 Q5NBQ1_ORYSA_Q5NBQ1; 5e-12 118-147
HMMPfam PF01502 PRA-CH 2e-20 95-151
IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase
Biological Process GO:0000105 histidine biosynthetic process    
Molecular Function GO:0004636 phosphoribosyl-ATP diphosphatase activity    
HMMTigr TIGR03188 histidine_hisI: 3e-20 159-247
IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like
HMMPfam PF01503 PRA-PH 1e-09 190-249
no_ID  
Gene3D G3DSA:1.10.287.1080 no description 7e-05 181-245
HMMPanther PTHR21256 HISTIDINOL 5.3e-95 65-254
HMMPanther PTHR21256:SF5 AT-IE 5.3e-95 65-254
superfamily SSF101386 all-alpha 5.1e-16 157-252
superfamily SSF141734 HisI-like 5.6e-23 65-147
Pseudomolecule
Chromosome Start End Strand
1836095143620006+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00016.1 maker exon 233449 233495 . - . ID=Zjn_sc00016.1.g00240.1.sm.mkhc:exon:5
Zjn_sc00016.1 maker exon 234915 235081 . - . ID=Zjn_sc00016.1.g00240.1.sm.mkhc:exon:4
Zjn_sc00016.1 maker exon 239562 239716 . - . ID=Zjn_sc00016.1.g00240.1.sm.mkhc:exon:3
Zjn_sc00016.1 maker exon 239969 240214 . - . ID=Zjn_sc00016.1.g00240.1.sm.mkhc:exon:2
Zjn_sc00016.1 maker exon 243723 243941 . - . ID=Zjn_sc00016.1.g00240.1.sm.mkhc:exon:1

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