Z. japonica Nagirizaki
Zjn_sc00015.1.g07990.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G23940.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 412 32 289 e-117 147.6 52.7 57.8
Subject 608 47 379
Annot | Symbols: | dehydratase family | chr3:8648780-8652323 FORWARD LENGTH=608
NR ref|XP_002445678.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 412 1 282 e-143 143.4 65.3 66.7
Subject 591 1 353
Annot hypothetical protein SORBIDRAFT_07g024070 [Sorghum bicolor] gi|241942028|gb|EES15173.1| hypothetical protein SORBIDRAFT_07g024070 [Sorghum bicolor]
IRGSP Os08t0559600-02_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 412 1 282 e-140 144.2 65.3 67
Subject 594 1 356
Annot
Sbicolor Sobic.007G167800.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 412 1 282 e-146 143.4 65.3 66.7
Subject 591 1 353
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00015.1.g07990.1.sm.mkhc length: 412 aa.
IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR21000 DIHYDROXY-ACID 3.2e-131 16-411
HMMPfam PF00920 ILVD_EDD 5.8e-52 70-163
163-259
279-408
IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel
Biological Process GO:0008152 metabolic process    
superfamily SSF52016 LeuD/IlvD-like 1.5e-43 278-411
IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
PatternScan PS00887 ILVD_EDD_2 NA 319-330
no_ID  
Seg seg seg NA 290-302
superfamily SSF143975 IlvD/EDD 1e-73 6-281
Pseudomolecule
Chromosome Start End Strand
1487005708704663+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00015.1 maker exon 4165520 4166002 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:1
Zjn_sc00015.1 maker exon 4166830 4166984 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:2
Zjn_sc00015.1 maker exon 4167124 4167256 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:3
Zjn_sc00015.1 maker exon 4167426 4167500 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:4
Zjn_sc00015.1 maker exon 4168292 4168393 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:5
Zjn_sc00015.1 maker exon 4168842 4168922 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:6
Zjn_sc00015.1 maker exon 4169081 4169239 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:7
Zjn_sc00015.1 maker exon 4169334 4169613 . + . ID=Zjn_sc00015.1.g07990.1.sm.mkhc:exon:8

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