Z. japonica Nagirizaki
Zjn_sc00015.1.g06990.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G43360.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 1 371 0.0 101.6 83.3 91.9
Subject 378 1 375
Annot | Symbols: BIO2, BIOB | Radical SAM superfamily protein | chr2:18010918-18013129 REVERSE LENGTH=378
NR ref|XP_004970356.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 1 372 0.0 103 93.5 96.5
Subject 383 4 383
Annot PREDICTED: biotin synthase-like [Setaria italica]
IRGSP Os08t0540100-02_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 1 372 0.0 102.4 91.7 94.6
Subject 381 2 381
Annot
Sbicolor Sobic.007G186000.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 372 1 372 0.0 102.4 91.9 95.4
Subject 381 4 381
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00015.1.g06990.1.sm.mkhc length: 372 aa.
IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB
method AccNumber shortName E-value location
Molecular Function GO:0004076 biotin synthase activity    
Biological Process GO:0009102 biotin biosynthetic process    
HAMAP MF_01694 BioB 40.509 38-348
HMMTigr TIGR00433 bioB: 1.6e-115 47-345
IPR006638 Elongator protein 3/MiaB/NifB
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMSmart SM00729 Elongator 9.6e-43 76-284
IPR007197 Radical SAM
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0051536 iron-sulfur cluster binding    
HMMPfam PF04055 Radical_SAM 2.6e-16 83-241
IPR010722 Biotin and thiamin synthesis-associated domain
HMMPfam PF06968 BATS 2.5e-25 255-347
HMMSmart SM00876 Biotin 6.5e-39 255-347
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 2.5e-99 38-348
no_ID  
HMMPanther PTHR22976 BIOTIN 1.1e-150 36-348
HMMPanther PTHR22976:SF1 BIOTIN 1.1e-150 36-348
Seg seg seg NA 2-28
219-229
240-251
superfamily SSF102114 Radical 5.6e-88 37-348
Pseudomolecule
Chromosome Start End Strand
1483159688318720+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00015.1 maker exon 3780918 3781097 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:1
Zjn_sc00015.1 maker exon 3781793 3781972 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:2
Zjn_sc00015.1 maker exon 3782082 3782188 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:3
Zjn_sc00015.1 maker exon 3782476 3782681 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:4
Zjn_sc00015.1 maker exon 3782805 3782944 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:5
Zjn_sc00015.1 maker exon 3783073 3783670 . + . ID=Zjn_sc00015.1.g06990.1.sm.mkhc:exon:6

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