Z. japonica Nagirizaki
Zjn_sc00015.1.g05660.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G76490.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 163 1 163 7e-71 393.9 74.8 87.7
Subject 642 218 380
Annot | Symbols: HMG1, HMGR1, AtHMGR1 | hydroxy methylglutaryl CoA reductase 1 | chr1:28695801-28698206 FORWARD LENGTH=642
NR ref|XP_004973895.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 163 1 163 5e-83 352.1 92 97.5
Subject 574 156 318
Annot PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase [Setaria italica]
IRGSP Os08t0512700-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 163 1 163 2e-85 286.5 90.8 96.3
Subject 467 49 211
Annot
Sbicolor Sobic.007G207600.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 163 1 163 8e-86 353.4 91.4 97.5
Subject 576 158 320
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00015.1.g05660.1.sm.mk length: 163 aa.
IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II
method AccNumber shortName E-value location
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00071 HMGCOARDTASE 1.2e-25 65-86
92-112
HMMPanther PTHR10572 3-HYDROXY-3-METHYLGLUTARYL-COENZYME 1.6e-90 1-163
HMMPfam PF00368 HMG-CoA_red 7.2e-44 31-161
ProfileScan PS50065 HMG_COA_REDUCTASE_4 50.243 5-163
IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF56542 Substrate-binding 4.8e-39 22-143
IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.90.770.10 no description 1.5e-45 23-149
Pseudomolecule
Chromosome Start End Strand
1476920007692491+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00015.1 maker_non_over exon 3156950 3157441 . + . ID=Zjn_sc00015.1.g05660.1.sm.mk:exon:1

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