Z. japonica Nagirizaki
Zjn_sc00015.1.g04190.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G78300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 14 267 e-117 97 77.5 84.3
Subject 259 5 258
Annot | Symbols: GRF2, 14-3-3OMEGA, GF14 OMEGA | general regulatory factor 2 | chr1:29461883-29463052 FORWARD LENGTH=259
NR ref|XP_004973733.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 7 266 e-132 97 92.9 93.6
Subject 259 2 259
Annot PREDICTED: 14-3-3-like protein GF14-A [Setaria italica]
IRGSP Os08t0480800-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 6 267 e-128 98.9 92.5 94
Subject 264 2 264
Annot
Sbicolor Sobic.007G226100.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 267 1 266 e-126 97 90.3 94
Subject 259 1 259
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00015.1.g04190.1.sm.mkhc length: 267 aa.
IPR000308 14-3-3 protein
method AccNumber shortName E-value location
Molecular Function GO:0019904 protein domain specific binding    
FPrintScan PR00305 1433ZETA 2.8e-86 48-77
97-121
128-150
163-189
190-216
217-246
HMMPIR PIRSF000868 14-3-3 1.5e-167 12-256
HMMPanther PTHR18860 14-3-3 4.3e-180 12-264
IPR023409 14-3-3 protein, conserved site
PatternScan PS00796 1433_1 NA 54-64
PatternScan PS00797 1433_2 NA 226-245
IPR023410 14-3-3 domain
Gene3D G3DSA:1.20.190.20 no description 2.7e-113 13-244
HMMPfam PF00244 14-3-3 6.6e-112 14-249
HMMSmart SM00101 14-3-3 1.7e-186 14-259
superfamily SSF48445 14-3-3 1.6e-100 11-246
no_ID  
Coil coil coiled-coil NA 20-41
HMMPanther PTHR18860:SF0 SUBFAMILY 4.3e-180 12-264
Seg seg seg NA 2-8
84-100
151-171
Pseudomolecule
Chromosome Start End Strand
1470243047026597-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00015.1 maker exon 2489254 2489705 . - . ID=Zjn_sc00015.1.g04190.1.sm.mkhc:exon:4
Zjn_sc00015.1 maker exon 2489781 2489903 . - . ID=Zjn_sc00015.1.g04190.1.sm.mkhc:exon:3
Zjn_sc00015.1 maker exon 2490688 2490810 . - . ID=Zjn_sc00015.1.g04190.1.sm.mkhc:exon:2
Zjn_sc00015.1 maker exon 2490920 2491547 . - . ID=Zjn_sc00015.1.g04190.1.sm.mkhc:exon:1

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