Z. japonica Nagirizaki
Zjn_sc00015.1.g03430.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G45249.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 13 329 1e-66 121.3 53.1 63.3
Subject 416 21 392
Annot | Symbols: ABF2, AREB1, ATAREB1 | abscisic acid responsive elements-binding factor 2 | chr1:17165420-17167415 REVERSE LENGTH=416
NR ref|XP_004973666.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 1 329 e-124 105 81.3 85.7
Subject 360 1 336
Annot PREDICTED: bZIP transcription factor TRAB1 [Setaria italica]
IRGSP Os09t0456200-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 7 332 2e-97 109.6 64.7 73.5
Subject 376 24 354
Annot
Sbicolor Sobic.008G043900.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 45 315 2e-99 79.6 67.1 70.3
Subject 273 1 272
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00015.1.g03430.1.sm.mkhc length: 343 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 1e-11 275-328
HMMSmart SM00338 basic 3e-11 271-335
PatternScan PS00036 BZIP_BASIC NA 278-293
ProfileScan PS50217 BZIP 10.806 273-324
no_ID  
Coil coil coiled-coil NA 294-329
Gene3D G3DSA:1.20.5.170 no description 4.4e-13 275-324
HMMPanther PTHR22952 CAMP-RESPONSE 3.2e-153 41-328
HMMPanther PTHR22952:SF55 PAN 3.2e-153 41-328
Seg seg seg NA 31-39
57-78
107-120
138-164
171-195
316-332
Pseudomolecule
Chromosome Start End Strand
1466725016676209+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00015.1 maker exon 2137451 2138335 . + . ID=Zjn_sc00015.1.g03430.1.sm.mkhc:exon:1
Zjn_sc00015.1 maker exon 2138500 2138571 . + . ID=Zjn_sc00015.1.g03430.1.sm.mkhc:exon:2
Zjn_sc00015.1 maker exon 2138755 2138784 . + . ID=Zjn_sc00015.1.g03430.1.sm.mkhc:exon:3
Zjn_sc00015.1 maker exon 2141115 2141159 . + . ID=Zjn_sc00015.1.g03430.1.sm.mkhc:exon:4

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