Z. japonica Nagirizaki
Zjn_sc00015.1.g03320.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G08080.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
187 |
1 |
181 |
5e-51 |
147.1 |
52.4 |
71.7 |
| Subject |
275 |
68 |
273 |
|
| Annot |
| Symbols: ATACA7, ACA7 | alpha carbonic anhydrase 7 | chr1:2517022-2518546 REVERSE LENGTH=275 |
| NR |
ref|XP_004973661.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
187 |
1 |
187 |
1e-79 |
152.4 |
79.1 |
92 |
| Subject |
285 |
74 |
285 |
|
| Annot |
PREDICTED: alpha carbonic anhydrase 7-like [Setaria italica] |
| IRGSP |
Os08t0470200-02_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
187 |
1 |
187 |
2e-77 |
147.1 |
72.2 |
92 |
| Subject |
275 |
64 |
275 |
|
| Annot |
|
| Sbicolor |
Sobic.007G155000.1.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
187 |
1 |
187 |
1e-81 |
149.7 |
78.1 |
91.4 |
| Subject |
280 |
69 |
280 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00015.1.g03320.1.sm.mkhc |
length: 187 aa. |
| IPR001148 |
Alpha carbonic anhydrase |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.10.200.10 |
no description |
2.7e-47 |
10-176 |
| HMMPfam |
PF00194 |
Carb_anhydrase |
4.1e-29 |
27-177 |
| HMMSmart |
SM01057 |
Eukaryotic-type |
1.4e-38 |
1-178 |
| ProfileScan |
PS51144 |
ALPHA_CA_2 |
39.407 |
1-180 |
| superfamily |
SSF51069 |
Carbonic |
1.3e-51 |
1-179 |
| IPR018338 |
Carbonic anhydrase, alpha-class, conserved site |
| Molecular Function |
GO:0004089 |
carbonate dehydratase activity |
|
|
| Biological Process |
GO:0006730 |
one-carbon metabolic process |
|
|
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| PatternScan |
PS00162 |
ALPHA_CA_1 |
NA |
42-58 |
| IPR023561 |
Carbonic anhydrase, alpha-class |
| HMMPanther |
PTHR18952 |
CARBONIC |
2e-65 |
15-181 |
| no_ID |
|
| HMMPanther |
PTHR18952:SF2 |
CARBONIC |
2e-65 |
15-181 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 14 | 6620589 | 6621838 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00015.1 |
maker |
exon |
2085539 |
2085847 |
. |
- |
. |
ID=Zjn_sc00015.1.g03320.1.sm.mkhc:exon:3 |
| Zjn_sc00015.1 |
maker |
exon |
2085998 |
2086432 |
. |
- |
. |
ID=Zjn_sc00015.1.g03320.1.sm.mkhc:exon:2 |
| Zjn_sc00015.1 |
maker |
exon |
2086747 |
2086788 |
. |
- |
. |
ID=Zjn_sc00015.1.g03320.1.sm.mkhc:exon:1 |