Z. japonica Nagirizaki
Zjn_sc00014.1.g10500.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37210.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 227 17 218 2e-88 94.7 65.2 78
Subject 215 9 210
Annot | Symbols: | lysine decarboxylase family protein | chr2:15624253-15626834 REVERSE LENGTH=215
NR ref|XP_004980976.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 227 10 216 1e-96 101.3 75.3 81.9
Subject 230 5 211
Annot PREDICTED: probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5 [Setaria italica]
IRGSP Os03t0857900-04_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 227 18 227 2e-87 108.4 75.8 82.8
Subject 246 29 246
Annot
Sbicolor Sobic.006G149300.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 227 18 217 1e-85 114.1 64.8 74.4
Subject 259 32 231
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g10500.1.sm.mkhc length: 227 aa.
IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
method AccNumber shortName E-value location
HMMPfam PF03641 Lysine_decarbox 1.7e-43 66-195
HMMTigr TIGR00730 TIGR00730: 8.3e-62 23-199
no_ID  
Gene3D G3DSA:3.40.50.450 no description 4.7e-84 15-197
HMMPanther PTHR31223 FAMILY 2.5e-104 19-227
Seg seg seg NA 73-84
superfamily SSF102405 MoCo 4.2e-66 17-200
Pseudomolecule
Chromosome Start End Strand
2113186114953-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker exon 4570380 4570581 . + . ID=Zjn_sc00014.1.g10500.1.sm.mkhc:exon:1
Zjn_sc00014.1 maker exon 4570764 4570992 . + . ID=Zjn_sc00014.1.g10500.1.sm.mkhc:exon:2
Zjn_sc00014.1 maker exon 4571578 4572147 . + . ID=Zjn_sc00014.1.g10500.1.sm.mkhc:exon:3

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