Z. japonica Nagirizaki
Zjn_sc00014.1.g08140.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G52340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 39 296 8e-82 59.4 31.9 39.2
Subject 285 22 284
Annot | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:19489997-19491527 REVERSE LENGTH=285
NR ref|XP_004981317.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 39 298 e-121 68.5 45 49.2
Subject 329 69 329
Annot PREDICTED: zerumbone synthase-like [Setaria italica]
IRGSP Os03t0810800-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 39 298 e-117 58.5 40.8 48.1
Subject 281 20 281
Annot
Sbicolor Sobic.001G042000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 39 298 e-124 58.8 45.4 49.2
Subject 282 20 282
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g08140.1.am.mk length: 480 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 9.8e-13 110-121
165-173
185-204
IPR002347 Glucose/ribitol dehydrogenase
FPrintScan PR00081 GDHRDH 4e-35 39-56
110-121
159-175
185-204
206-223
250-270
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 8.8e-70 44-287
no_ID  
HMMPanther PTHR24322 FAMILY 2e-52 44-314
HMMPfam PF13561 adh_short_C2 6.6e-28 46-287
Seg seg seg NA 21-34
94-108
165-179
230-243
253-264
316-329
345-358
440-454
superfamily SSF51735 NAD(P)-binding 7.4e-68 33-285
Pseudomolecule
Chromosome Start End Strand
2997419999966-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker_non_over exon 3685367 3685496 . + . ID=Zjn_sc00014.1.g08140.1.am.mk:exon:1
Zjn_sc00014.1 maker_non_over exon 3685616 3686378 . + . ID=Zjn_sc00014.1.g08140.1.am.mk:exon:2
Zjn_sc00014.1 maker_non_over exon 3686984 3687185 . + . ID=Zjn_sc00014.1.g08140.1.am.mk:exon:3
Zjn_sc00014.1 maker_non_over exon 3687399 3687701 . + . ID=Zjn_sc00014.1.g08140.1.am.mk:exon:4
Zjn_sc00014.1 maker_non_over exon 3687870 3687914 . + . ID=Zjn_sc00014.1.g08140.1.am.mk:exon:5

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