Z. japonica Nagirizaki
Zjn_sc00014.1.g06390.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT2G34770.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
158 |
71 |
158 |
5e-32 |
150 |
38 |
44.9 |
| Subject |
237 |
148 |
235 |
|
| Annot |
| Symbols: FAH1, ATFAH1 | fatty acid hydroxylase 1 | chr2:14666776-14668061 FORWARD LENGTH=237 |
| NR |
gb|EMS68869.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
158 |
1 |
156 |
2e-46 |
86.1 |
61.4 |
70.9 |
| Subject |
136 |
1 |
132 |
|
| Annot |
hypothetical protein TRIUR3_31513 [Triticum urartu] |
| IRGSP |
Os03t0780800-02_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
158 |
73 |
158 |
1e-40 |
150 |
48.1 |
51.9 |
| Subject |
237 |
150 |
236 |
|
| Annot |
|
| Sbicolor |
Sobic.001G069700.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
158 |
71 |
155 |
2e-42 |
150 |
50 |
50.6 |
| Subject |
237 |
148 |
232 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00014.1.g06390.1.sm.mk |
length: 158 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12863 |
FATTY |
2.5e-36 |
71-157 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 2 | 1741516 | 1743063 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00014.1 |
maker_non_over |
exon |
2942270 |
2942320 |
. |
+ |
. |
ID=Zjn_sc00014.1.g06390.1.sm.mk:exon:1 |
| Zjn_sc00014.1 |
maker_non_over |
exon |
2942799 |
2942865 |
. |
+ |
. |
ID=Zjn_sc00014.1.g06390.1.sm.mk:exon:2 |
| Zjn_sc00014.1 |
maker_non_over |
exon |
2943253 |
2943350 |
. |
+ |
. |
ID=Zjn_sc00014.1.g06390.1.sm.mk:exon:3 |
| Zjn_sc00014.1 |
maker_non_over |
exon |
2943454 |
2943600 |
. |
+ |
. |
ID=Zjn_sc00014.1.g06390.1.sm.mk:exon:4 |
| Zjn_sc00014.1 |
maker_non_over |
exon |
2943704 |
2943817 |
. |
+ |
. |
ID=Zjn_sc00014.1.g06390.1.sm.mk:exon:5 |