Z. japonica Nagirizaki
Zjn_sc00014.1.g04970.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G29910.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 330 8 263 8e-46 161.8 32.7 47
Subject 534 12 273
Annot | Symbols: ORC5, ATORC5 | origin recognition complex protein 5 | chr4:14628154-14630055 REVERSE LENGTH=534
NR ref|XP_002466418.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 330 1 263 8e-92 159.1 63.3 70.3
Subject 525 1 262
Annot hypothetical protein SORBIDRAFT_01g007460 [Sorghum bicolor] gi|241920272|gb|EER93416.1| hypothetical protein SORBIDRAFT_01g007460 [Sorghum bicolor]
IRGSP Os03t0759500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 330 1 273 2e-69 158.8 57.9 66.4
Subject 524 1 266
Annot
Sbicolor Sobic.001G082800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 330 1 263 8e-95 159.1 63.3 70.3
Subject 525 1 262
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g04970.1.sm.mk length: 330 aa.
IPR020796 Origin recognition complex, subunit 5
method AccNumber shortName E-value location
Cellular Component GO:0000808 origin recognition complex    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMPanther PTHR12705 ORIGIN 2.2e-43 51-263
HMMPfam PF14630 ORC5_C 1.1e-06 273-306
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.9e-12 57-316
no_ID  
Gene3D G3DSA:3.40.50.300 no description 7e-09 61-217
HMMPfam PF13191 AAA_16 3e-09 63-212
Seg seg seg NA 12-36
65-92
123-146
194-207
Pseudomolecule
Chromosome Start End Strand
223441962346628-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker_non_over exon 2338705 2339495 . + . ID=Zjn_sc00014.1.g04970.1.sm.mk:exon:1
Zjn_sc00014.1 maker_non_over exon 2340141 2340336 . + . ID=Zjn_sc00014.1.g04970.1.sm.mk:exon:2
Zjn_sc00014.1 maker_non_over exon 2341132 2341137 . + . ID=Zjn_sc00014.1.g04970.1.sm.mk:exon:3

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