Z. japonica Nagirizaki
Zjn_sc00014.1.g04770.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G15490.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 1 480 0.0 100 90.2 94.8
Subject 480 1 480
Annot | Symbols: | UDP-glucose 6-dehydrogenase family protein | chr5:5027872-5029314 REVERSE LENGTH=480
NR ref|XP_004981706.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 1 480 0.0 100 99.2 100
Subject 480 1 480
Annot PREDICTED: UDP-glucose 6-dehydrogenase 5 [Setaria italica]
IRGSP Os12t0443600-02_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 1 480 0.0 100 95.8 98.5
Subject 480 1 480
Annot
Sbicolor Sobic.001G084100.5.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 480 1 480 0.0 100 99.2 100
Subject 480 1 480
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g04770.1.sm.mkhc length: 480 aa.
IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF03721 UDPG_MGDP_dh_N 3.3e-64 3-185
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF48179 6-phosphogluconate 1.6e-31 209-310
IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00984 UDPG_MGDP_dh 1.5e-33 209-306
IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF03720 UDPG_MGDP_dh_C 7.5e-37 328-452
HMMSmart SM00984 UDP 6.3e-39 328-452
superfamily SSF52413 UDP-glucose/GDP-mannose 5.1e-37 313-463
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.5e-96 3-212
241-476
IPR017476 Nucleotide sugar dehydrogenase
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR03026 NDP-sugDHase: 4e-104 3-448
no_ID  
Gene3D G3DSA:1.20.5.100 no description 3.9e-14 213-239
HMMPanther PTHR11374 UDP-GLUCOSE 1e-285 1-468
superfamily SSF51735 NAD(P)-binding 2e-45 2-215
Pseudomolecule
Chromosome Start End Strand
224144652417586-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker exon 2267747 2268091 . + . ID=Zjn_sc00014.1.g04770.1.sm.mkhc:exon:1
Zjn_sc00014.1 maker exon 2269078 2270868 . + . ID=Zjn_sc00014.1.g04770.1.sm.mkhc:exon:2

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