Z. japonica Nagirizaki
Zjn_sc00014.1.g04320.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G08470.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 400 75 395 e-106 97.5 48.3 61.8
Subject 390 18 388
Annot | Symbols: SSL3 | strictosidine synthase-like 3 | chr1:2682262-2683977 REVERSE LENGTH=390
NR ref|XP_004981761.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 400 75 400 e-153 99.5 70 74
Subject 398 21 398
Annot PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Setaria italica]
IRGSP Os03t0750700-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 400 75 400 e-141 99.8 63.3 71.5
Subject 399 23 399
Annot
Sbicolor Sobic.001G088200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 400 75 400 e-155 99.5 69.3 74.3
Subject 398 21 398
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g04320.1.sm.mkhc length: 400 aa.
IPR011042 Six-bladed beta-propeller, TolB-like
method AccNumber shortName E-value location
Gene3D G3DSA:2.120.10.30 no description 6.2e-23 115-221
224-394
IPR018119 Strictosidine synthase, conserved region
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016844 strictosidine synthase activity    
HMMPfam PF03088 Str_synth 1e-15 222-277
no_ID  
HMMPanther PTHR10426 STRICTOSIDINE 1.3e-140 95-400
HMMPanther PTHR10426:SF5 STRICTOSIDINE 1.3e-140 95-400
Seg seg seg NA 24-40
50-71
357-376
superfamily SSF63829 Calcium-dependent 3.1e-32 86-396
Pseudomolecule
Chromosome Start End Strand
225872722590273+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker exon 2095060 2095169 . - . ID=Zjn_sc00014.1.g04320.1.sm.mkhc:exon:5
Zjn_sc00014.1 maker exon 2095189 2095472 . - . ID=Zjn_sc00014.1.g04320.1.sm.mkhc:exon:4
Zjn_sc00014.1 maker exon 2095563 2095703 . - . ID=Zjn_sc00014.1.g04320.1.sm.mkhc:exon:3
Zjn_sc00014.1 maker exon 2096796 2097453 . - . ID=Zjn_sc00014.1.g04320.1.sm.mkhc:exon:2
Zjn_sc00014.1 maker exon 2098052 2098061 . - . ID=Zjn_sc00014.1.g04320.1.sm.mkhc:exon:1

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