Z. japonica Nagirizaki
Zjn_sc00014.1.g03290.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G19220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 220 425 2e-95 122.8 37.6 42.6
Subject 522 317 522
Annot | Symbols: ADG2, APL1 | ADP glucose pyrophosphorylase large subunit 1 | chr5:6463931-6466775 REVERSE LENGTH=522
NR ref|XP_007153923.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 56 425 e-145 122.6 64.2 74.1
Subject 521 61 521
Annot hypothetical protein PHAVU_003G076500g [Phaseolus vulgaris] gi|561027277|gb|ESW25917.1| hypothetical protein PHAVU_003G076500g [Phaseolus vulgaris]
IRGSP Os03t0735000-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 143 425 e-113 120.2 48.9 55.8
Subject 511 238 511
Annot
Sbicolor Sobic.001G100000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 425 206 425 e-112 119.3 45.2 48.7
Subject 507 289 507
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g03290.1.am.mkhc length: 425 aa.
IPR005835 Nucleotidyl transferase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF00483 NTP_transferase 2.1e-07 80-219
222-271
IPR005836 ADP-glucose pyrophosphorylase, conserved site
Biological Process GO:0005978 glycogen biosynthetic process    
Molecular Function GO:0008878 glucose-1-phosphate adenylyltransferase activity    
PatternScan PS00808 ADP_GLC_PYROPHOSPH_1 NA 84-103
PatternScan PS00809 ADP_GLC_PYROPHOSPH_2 NA 175-183
IPR011004 Trimeric LpxA-like
superfamily SSF51161 Trimeric 1.7e-25 287-425
no_ID  
Gene3D G3DSA:2.160.10.10 no description 1.9e-15 298-425
Gene3D G3DSA:3.90.550.10 no description 3.4e-06 79-219
226-279
HMMPanther PTHR22572 SUGAR-1-PHOSPHATE 5.1e-167 65-425
HMMPanther PTHR22572:SF10 GLUCOSE-1-PHOSPHATE 5.1e-167 65-425
Seg seg seg NA 3-26
40-61
superfamily SSF53448 Nucleotide-diphospho-sugar 2.4e-50 67-387
Pseudomolecule
Chromosome Start End Strand
229715012976065+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker exon 1709268 1709650 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:12
Zjn_sc00014.1 maker exon 1709866 1709926 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:11
Zjn_sc00014.1 maker exon 1710017 1710123 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:10
Zjn_sc00014.1 maker exon 1710264 1710368 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:9
Zjn_sc00014.1 maker exon 1710638 1710724 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:8
Zjn_sc00014.1 maker exon 1710932 1711012 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:7
Zjn_sc00014.1 maker exon 1711377 1711454 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:6
Zjn_sc00014.1 maker exon 1712365 1712448 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:5
Zjn_sc00014.1 maker exon 1712928 1713020 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:4
Zjn_sc00014.1 maker exon 1713112 1713285 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:3
Zjn_sc00014.1 maker exon 1713443 1713556 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:2
Zjn_sc00014.1 maker exon 1713641 1713832 . - . ID=Zjn_sc00014.1.g03290.1.am.mkhc:exon:1

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