Z. japonica Nagirizaki
Zjn_sc00014.1.g02710.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G37770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 821 14 485 e-178 57.1 35.9 43.4
Subject 469 4 429
Annot | Symbols: ACS8 | 1-amino-cyclopropane-1-carboxylate synthase 8 | chr4:17752222-17753925 FORWARD LENGTH=469
NR dbj|BAC56949.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 821 3 527 0.0 58.7 48.8 53
Subject 482 1 482
Annot ACC synthase [Phyllostachys edulis]
IRGSP Os03t0727600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 821 7 527 0.0 59.3 49.5 52.7
Subject 487 6 487
Annot
Sbicolor Sobic.001G105900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 821 7 527 0.0 60.5 49.5 51.6
Subject 497 6 497
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g02710.1.am.mk length: 821 aa.
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 325-338
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 1.8e-94 94-480
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 1e-65 149-369
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 5e-14 370-486
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 1.7e-106 13-486
no_ID  
FPrintScan PR00753 ACCSYNTHASE 5.4e-69 88-114
122-138
248-272
284-307
319-343
351-374
HMMPanther PTHR11751 SUBGROUP 1.3e-184 16-486
HMMPanther PTHR11751:SF26 ACC 1.3e-184 16-486
Seg seg seg NA 742-757
804-815
Pseudomolecule
Chromosome Start End Strand
232879963293043+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker_non_over exon 1392290 1392608 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:9
Zjn_sc00014.1 maker_non_over exon 1393499 1393670 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:8
Zjn_sc00014.1 maker_non_over exon 1393735 1393826 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:7
Zjn_sc00014.1 maker_non_over exon 1394297 1394407 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:6
Zjn_sc00014.1 maker_non_over exon 1394491 1394620 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:5
Zjn_sc00014.1 maker_non_over exon 1395307 1395368 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:4
Zjn_sc00014.1 maker_non_over exon 1395525 1396487 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:3
Zjn_sc00014.1 maker_non_over exon 1396647 1396807 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:2
Zjn_sc00014.1 maker_non_over exon 1396882 1397337 . - . ID=Zjn_sc00014.1.g02710.1.am.mk:exon:1

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