Z. japonica Nagirizaki
Zjn_sc00014.1.g01990.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G10050.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 442 9 436 e-156 133.9 71 82.4
Subject 592 75 591
Annot | Symbols: OMR1 | L-O-methylthreonine resistant 1 | chr3:3099164-3101741 REVERSE LENGTH=592
NR ref|XP_002466574.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 442 22 442 0.0 136.9 86.4 90.5
Subject 605 98 605
Annot hypothetical protein SORBIDRAFT_01g010250 [Sorghum bicolor] gi|241920428|gb|EER93572.1| hypothetical protein SORBIDRAFT_01g010250 [Sorghum bicolor]
IRGSP Os03t0713000-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 442 25 442 0.0 136.2 85.3 89.8
Subject 602 98 602
Annot
Sbicolor Sobic.001G116100.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 442 22 442 0.0 136.9 86.4 90.5
Subject 605 98 605
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g01990.1.sm.mkhc length: 442 aa.
IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00165 DEHYDRATASE_SER_THR NA 64-77
IPR001721 Threonine dehydratase, C-terminal regulatory domain
Molecular Function GO:0004794 L-threonine ammonia-lyase activity    
Biological Process GO:0009097 isoleucine biosynthetic process    
HMMPfam PF00585 Thr_dehydrat_C 5.1e-10 327-388
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 3.2e-72 42-317
superfamily SSF53686 Tryptophan 2.4e-98 36-336
IPR005787 Threonine dehydratase, biosynthetic
Molecular Function GO:0004794 L-threonine ammonia-lyase activity    
Biological Process GO:0009097 isoleucine biosynthetic process    
HMMTigr TIGR01124 ilvA_2Cterm: 1.2e-135 26-328
no_ID  
Gene3D G3DSA:3.40.1020.10 no description 2.7e-06 387-436
Gene3D G3DSA:3.40.50.1100 no description 4.8e-76 91-326
HMMPanther PTHR10314 SER/THR 1.1e-181 32-442
HMMPanther PTHR10314:SF30 THREONINE 1.1e-181 32-442
Seg seg seg NA 4-24
200-210
286-299
superfamily SSF55021 ACT-like 2.3e-07 307-392
389-438
Pseudomolecule
Chromosome Start End Strand
236480473655961-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker exon 1029372 1029575 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:1
Zjn_sc00014.1 maker exon 1030250 1030429 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:2
Zjn_sc00014.1 maker exon 1030579 1030848 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:3
Zjn_sc00014.1 maker exon 1031084 1031257 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:4
Zjn_sc00014.1 maker exon 1031745 1031897 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:5
Zjn_sc00014.1 maker exon 1035481 1035554 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:6
Zjn_sc00014.1 maker exon 1035669 1035786 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:7
Zjn_sc00014.1 maker exon 1036484 1037286 . + . ID=Zjn_sc00014.1.g01990.1.sm.mkhc:exon:8

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