Z. japonica Nagirizaki
Zjn_sc00014.1.g01100.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G55020.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 135 33 133 4e-27 636.3 36.3 54.1
Subject 859 66 165
Annot | Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859
NR ref|XP_002466614.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 135 31 133 5e-48 641.5 66.7 72.6
Subject 866 62 164
Annot hypothetical protein SORBIDRAFT_01g011050 [Sorghum bicolor] gi|241920468|gb|EER93612.1| hypothetical protein SORBIDRAFT_01g011050 [Sorghum bicolor]
IRGSP Os03t0738600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 135 28 131 9e-46 644.4 59.3 68.1
Subject 870 57 160
Annot
Sbicolor Sobic.001G125900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 135 31 133 4e-51 641.5 66.7 72.6
Subject 866 62 164
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00014.1.g01100.1.sm.mk length: 135 aa.
IPR000907 Lipoxygenase
method AccNumber shortName E-value location
Molecular Function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen    
Molecular Function GO:0046872 metal ion binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11771 LIPOXYGENASE 2.3e-23 62-130
IPR001024 PLAT/LH2 domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.60.60.20 no description 2.7e-34 34-132
HMMPfam PF01477 PLAT 4.1e-17 38-128
HMMSmart SM00308 Lipoxygenase 8e-27 16-130
ProfileScan PS50095 PLAT 16.855 8-129
IPR001246 Lipoxygenase, plant
Molecular Function GO:0005506 iron ion binding    
Molecular Function GO:0016165 lipoxygenase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00468 PLTLPOXGNASE 2.7e-06 99-117
125-135
IPR008976 Lipase/lipooxygenase, PLAT/LH2
superfamily SSF49723 Lipase/lipooxygenase 1e-36 33-133
no_ID  
HMMPanther PTHR11771:SF2 LIPOXYGENASE 2.3e-23 62-130
Pseudomolecule
Chromosome Start End Strand
241401044140693-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00014.1 maker_non_over exon 544640 545032 . + . ID=Zjn_sc00014.1.g01100.1.sm.mk:exon:1
Zjn_sc00014.1 maker_non_over exon 545215 545229 . + . ID=Zjn_sc00014.1.g01100.1.sm.mk:exon:2

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