Z. japonica Nagirizaki
Zjn_sc00013.1.g10570.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G23240.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 216 29 204 5e-43 100.9 41.2 55.6
Subject 218 37 217
Annot | Symbols: ERF1, ATERF1 | ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218
NR ref|XP_003559098.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 216 9 216 5e-47 131.5 63.4 72.7
Subject 284 22 284
Annot PREDICTED: ethylene-responsive transcription factor 1B-like [Brachypodium distachyon]
IRGSP Os03t0860100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 216 3 216 9e-47 104.2 53.2 64.4
Subject 225 22 225
Annot
Sbicolor Sobic.001G002500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 216 45 216 8e-46 136.1 59.7 64.8
Subject 294 105 294
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g10570.1.sm.mk length: 216 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.1e-12 75-86
114-134
Gene3D G3DSA:3.30.730.10 no description 5.9e-29 74-132
HMMPfam PF00847 AP2 4.4e-16 74-125
HMMSmart SM00380 DNA-binding 1.6e-35 74-138
ProfileScan PS51032 AP2_ERF 22.932 74-132
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 8e-24 73-135
no_ID  
HMMPanther PTHR31190 FAMILY 5.8e-22 58-134
HMMPanther PTHR31190:SF0 SUBFAMILY 5.8e-22 58-134
Seg seg seg NA 55-70
160-171
199-215
Pseudomolecule
Chromosome Start End Strand
1100414101064+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 4741643 4742293 . - . ID=Zjn_sc00013.1.g10570.1.sm.mk:exon:1

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