Z. japonica Nagirizaki
Zjn_sc00013.1.g09640.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G34370.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 6 364 1e-74 133.8 43.7 62.2
Subject 499 57 463
Annot | Symbols: STOP1 | C2H2 and C2HC zinc fingers superfamily protein | chr1:12551002-12552501 FORWARD LENGTH=499
NR ref|XP_004986133.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 5 369 e-121 98.7 67.6 76.1
Subject 368 6 365
Annot PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Setaria italica]
IRGSP Os03t0838800-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 29 371 1e-98 98.4 52.8 61.4
Subject 367 46 367
Annot
Sbicolor Sobic.001G020200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 1 371 e-113 106.2 65.4 74.5
Subject 396 1 396
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g09640.1.sm.mk length: 373 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00096 zf-C2H2 4.4e-05 126-148
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 128-148
ProfileScan PS50157 ZINC_FINGER_C2H2_2 12.321 126-153
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 1.6e-05 126-151
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 28 126-148
184-217
222-244
no_ID  
HMMPanther PTHR11389 ZINC 6.7e-62 110-276
HMMPanther PTHR11389:SF379AZ2-RELATED T[110-276] 6.7e-62  
Seg seg seg NA 358-373
superfamily SSF57667 C2H2 0.0077 125-152
220-269
Pseudomolecule
Chromosome Start End Strand
1453694454815-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 4387892 4389013 . + . ID=Zjn_sc00013.1.g09640.1.sm.mk:exon:1

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