Z. japonica Nagirizaki
Zjn_sc00013.1.g09480.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G36360.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 413 88 412 7e-92 120.1 48.7 61.3
Subject 496 3 439
Annot | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr2:15243461-15247523 REVERSE LENGTH=496
NR ref|XP_004981188.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 413 78 412 e-135 142.6 65.6 71.4
Subject 589 89 536
Annot PREDICTED: serine/threonine-protein phosphatase BSL1 [Setaria italica]
IRGSP Os03t0835800-02_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 413 81 412 e-129 121.3 62.5 67.6
Subject 501 4 448
Annot
Sbicolor Sobic.001G023000.2.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 413 79 412 e-148 121.5 70.2 73.6
Subject 502 1 449
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g09480.1.am.mkhc length: 413 aa.
IPR006652 Kelch repeat type 1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00612 no description 0.026 117-166
168-217
IPR015915 Kelch-type beta propeller
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.120.10.80 no description 1e-35 78-236
no_ID  
HMMPanther PTHR23244 KELCH 2.1e-149 65-407
HMMPanther PTHR23244:SF96 PREDICTED 2.1e-149 65-407
HMMPfam PF13415 Kelch_3 1.1e-06 167-213
218-271
HMMPfam PF13418 Kelch_4 6.4e-09 104-154
superfamily SSF117281 Kelch 2e-40 84-294
Pseudomolecule
Chromosome Start End Strand
1516403521836-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 4320871 4321187 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:1
Zjn_sc00013.1 maker exon 4321273 4321370 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:2
Zjn_sc00013.1 maker exon 4322149 4322245 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:3
Zjn_sc00013.1 maker exon 4322330 4322385 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:4
Zjn_sc00013.1 maker exon 4322493 4322600 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:5
Zjn_sc00013.1 maker exon 4322815 4322871 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:6
Zjn_sc00013.1 maker exon 4323218 4323309 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:7
Zjn_sc00013.1 maker exon 4323761 4323845 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:8
Zjn_sc00013.1 maker exon 4324359 4324453 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:9
Zjn_sc00013.1 maker exon 4324541 4324717 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:10
Zjn_sc00013.1 maker exon 4325545 4325635 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:11
Zjn_sc00013.1 maker exon 4325744 4326304 . + . ID=Zjn_sc00013.1.g09480.1.am.mkhc:exon:12

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