Z. japonica Nagirizaki
Zjn_sc00013.1.g09280.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G15940.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
106 |
6 |
96 |
8e-20 |
209.4 |
46.2 |
56.6 |
| Subject |
222 |
7 |
99 |
|
| Annot |
| Symbols: | Fumarylacetoacetate (FAA) hydrolase family | chr4:9038361-9040163 FORWARD LENGTH=222 |
| NR |
tpg|DAA50745.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
106 |
4 |
101 |
4e-29 |
194.3 |
72.6 |
80.2 |
| Subject |
206 |
5 |
129 |
|
| Annot |
TPA: hypothetical protein ZEAMMB73_145846 [Zea mays] |
| IRGSP |
Os03t0829000-03_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
106 |
12 |
101 |
6e-27 |
213.2 |
69.8 |
72.6 |
| Subject |
226 |
12 |
149 |
|
| Annot |
|
| Sbicolor |
Sobic.001G132000.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
106 |
4 |
101 |
1e-30 |
215.1 |
75.5 |
80.2 |
| Subject |
228 |
6 |
151 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00013.1.g09280.1.sm.mkhc |
length: 106 aa. |
| IPR002529 |
Fumarylacetoacetase, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF01557 |
FAA_hydrolase |
5.6e-10 |
14-90 |
| IPR011234 |
Fumarylacetoacetase, C-terminal-related |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Gene3D |
G3DSA:3.90.850.10 |
no description |
1.5e-17 |
13-91 |
| superfamily |
SSF56529 |
FAH |
6.5e-15 |
11-87 |
| no_ID |
|
| HMMPanther |
PTHR11820 |
FUMARYLACETOACETATE |
2.6e-18 |
13-91 |
| Seg |
seg |
seg |
NA |
49-58 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 1 | 572727 | 575553 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00013.1 |
maker |
exon |
4267154 |
4267255 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:1 |
| Zjn_sc00013.1 |
maker |
exon |
4267377 |
4267454 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:2 |
| Zjn_sc00013.1 |
maker |
exon |
4267471 |
4267555 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:3 |
| Zjn_sc00013.1 |
maker |
exon |
4269178 |
4269215 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:4 |
| Zjn_sc00013.1 |
maker |
exon |
4269529 |
4269661 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:5 |
| Zjn_sc00013.1 |
maker |
exon |
4269748 |
4269980 |
. |
+ |
. |
ID=Zjn_sc00013.1.g09280.1.sm.mkhc:exon:6 |