Z. japonica Nagirizaki
Zjn_sc00013.1.g09250.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G06580.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 431 8 422 e-175 115.1 71.7 82.1
Subject 496 55 496
Annot | Symbols: GAL1, GALK | Mevalonate/galactokinase family protein | chr3:2049141-2051867 REVERSE LENGTH=496
NR ref|XP_002463584.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 431 8 422 0.0 116.5 89.3 92.6
Subject 502 62 502
Annot hypothetical protein SORBIDRAFT_01g002480 [Sorghum bicolor] gi|241917438|gb|EER90582.1| hypothetical protein SORBIDRAFT_01g002480 [Sorghum bicolor]
IRGSP Os03t0832600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 431 8 422 0.0 117.4 87.7 91.9
Subject 506 66 506
Annot
Sbicolor Sobic.001G026000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 431 8 422 0.0 116.5 89.3 92.6
Subject 502 62 502
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g09250.1.sm.mkhc length: 431 aa.
IPR000705 Galactokinase
method AccNumber shortName E-value location
Molecular Function GO:0004335 galactokinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006012 galactose metabolic process    
Biological Process GO:0046835 carbohydrate phosphorylation    
FPrintScan PR00473 GALCTOKINASE 7.2e-21 8-26
74-85
101-119
315-329
HMMPIR PIRSF000530 Galactokinase 1.8e-125 1-422
IPR006203 GHMP kinase, ATP-binding, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00627 GHMP_KINASES_ATP NA 110-121
IPR006204 GHMP kinase N-terminal domain
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00288 GHMP_kinases_N 2.4e-12 103-168
IPR006206 Mevalonate/galactokinase
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016301 kinase activity    
Molecular Function GO:0016773 phosphotransferase activity, alcohol group as acceptor    
FPrintScan PR00959 MEVGALKINASE 1.5e-37 6-30
108-130
150-169
357-374
IPR013750 GHMP kinase, C-terminal domain
HMMPfam PF08544 GHMP_kinases_C 2.3e-10 336-390
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 9e-61 7-195
IPR019539 Galactokinase galactose-binding domain
HMMPfam PF10509 GalKase_gal_bdg 1.8e-15 7-39
IPR019741 Galactokinase, conserved site
PatternScan PS00106 GALACTOKINASE NA 8-19
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 5.5e-47 1-192
no_ID  
Gene3D G3DSA:3.30.70.890 no description 7.7e-23 312-336
337-418
HMMPanther PTHR10457 MEVALONATE 4.5e-176 8-429
HMMPanther PTHR10457:SF7 GALACTOKINASE 4.5e-176 8-429
superfamily SSF55060 GHMP 2.6e-32 192-420
Pseudomolecule
Chromosome Start End Strand
1585357590761+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 4251946 4252263 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:11
Zjn_sc00013.1 maker exon 4252424 4252565 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:10
Zjn_sc00013.1 maker exon 4253286 4253356 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:9
Zjn_sc00013.1 maker exon 4253455 4253589 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:8
Zjn_sc00013.1 maker exon 4253859 4253993 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:7
Zjn_sc00013.1 maker exon 4254326 4254511 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:6
Zjn_sc00013.1 maker exon 4254643 4254711 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:5
Zjn_sc00013.1 maker exon 4254884 4254966 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 4255043 4255137 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 4255259 4255305 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 4257156 4257350 . - . ID=Zjn_sc00013.1.g09250.1.sm.mkhc:exon:1

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