Z. japonica Nagirizaki
Zjn_sc00013.1.g08010.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G52340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 130 371 3e-72 76.4 37 46.9
Subject 285 42 284
Annot | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | NAD(P)-binding Rossmann-fold superfamily protein | chr1:19489997-19491527 REVERSE LENGTH=285
NR ref|XP_002466226.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 130 373 e-116 75.6 56 60.6
Subject 282 40 282
Annot hypothetical protein SORBIDRAFT_01g003880 [Sorghum bicolor] gi|241920080|gb|EER93224.1| hypothetical protein SORBIDRAFT_01g003880 [Sorghum bicolor]
IRGSP Os03t0810800-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 130 373 e-115 75.3 51.7 60.1
Subject 281 40 281
Annot
Sbicolor Sobic.001G042000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 373 130 373 e-119 75.6 56 60.6
Subject 282 40 282
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g08010.1.am.mk length: 373 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00080 SDRFAMILY 5.1e-13 184-195
240-248
260-279
IPR002347 Glucose/ribitol dehydrogenase
FPrintScan PR00081 GDHRDH 4.5e-29 184-195
234-250
260-279
281-298
325-345
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.6e-64 130-362
no_ID  
HMMPanther PTHR24322 FAMILY 7.3e-47 130-360
HMMPfam PF13561 adh_short_C2 1.2e-24 130-362
Seg seg seg NA 26-47
61-76
superfamily SSF51735 NAD(P)-binding 2.7e-60 130-360
Pseudomolecule
Chromosome Start End Strand
110479651049820-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 3792887 3792892 . + . ID=Zjn_sc00013.1.g08010.1.am.mk:exon:1
Zjn_sc00013.1 maker_non_over exon 3792960 3793200 . + . ID=Zjn_sc00013.1.g08010.1.am.mk:exon:2
Zjn_sc00013.1 maker_non_over exon 3793555 3793693 . + . ID=Zjn_sc00013.1.g08010.1.am.mk:exon:3
Zjn_sc00013.1 maker_non_over exon 3794007 3794742 . + . ID=Zjn_sc00013.1.g08010.1.am.mk:exon:4

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