Z. japonica Nagirizaki
Zjn_sc00013.1.g07910.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G57520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1065 214 738 0.0 72.6 34.1 39.9
Subject 773 1 510
Annot | Symbols: AtSIP2, SIP2 | seed imbibition 2 | chr3:21288982-21292694 REVERSE LENGTH=773
NR ref|XP_004981334.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1065 214 738 0.0 71.9 42.8 44.4
Subject 766 1 523
Annot PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Setaria italica]
IRGSP Os03t0808900-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1065 214 712 0.0 47.4 37.7 40.3
Subject 505 1 490
Annot
Sbicolor Sobic.001G044800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1065 214 738 0.0 72.6 41.6 43.9
Subject 773 1 531
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g07910.1.am.mk length: 1065 aa.
IPR008811 Glycosyl hydrolases 36
method AccNumber shortName E-value location
HMMPfam PF05691 Raffinose_syn 2.3e-92 220-735
818-1049
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:3.20.20.70 no description 1.1e-59 578-738
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 2.5e-57 416-739
no_ID  
HMMPanther PTHR31268 FAMILY 0 215-1065
HMMPanther PTHR31268:SF0 SUBFAMILY 0 215-1065
Seg seg seg NA 202-213
Pseudomolecule
Chromosome Start End Strand
110919031098493-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 3744214 3744294 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:1
Zjn_sc00013.1 maker_non_over exon 3744501 3744562 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:2
Zjn_sc00013.1 maker_non_over exon 3744630 3744699 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:3
Zjn_sc00013.1 maker_non_over exon 3744891 3744985 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:4
Zjn_sc00013.1 maker_non_over exon 3745554 3745611 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:5
Zjn_sc00013.1 maker_non_over exon 3746188 3746414 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:6
Zjn_sc00013.1 maker_non_over exon 3746744 3746980 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:7
Zjn_sc00013.1 maker_non_over exon 3747257 3747498 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:8
Zjn_sc00013.1 maker_non_over exon 3747621 3747706 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:9
Zjn_sc00013.1 maker_non_over exon 3748246 3748326 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:10
Zjn_sc00013.1 maker_non_over exon 3748381 3748472 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:11
Zjn_sc00013.1 maker_non_over exon 3748556 3748666 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:12
Zjn_sc00013.1 maker_non_over exon 3748762 3749455 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:13
Zjn_sc00013.1 maker_non_over exon 3749534 3749601 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:14
Zjn_sc00013.1 maker_non_over exon 3749670 3749915 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:15
Zjn_sc00013.1 maker_non_over exon 3749953 3750087 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:16
Zjn_sc00013.1 maker_non_over exon 3750192 3750804 . + . ID=Zjn_sc00013.1.g07910.1.am.mk:exon:17

Top