Z. japonica Nagirizaki
Zjn_sc00013.1.g06550.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G04870.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 635 1 629 0.0 96.1 68.3 78.7
Subject 610 1 609
Annot | Symbols: CPK1, ATCPK1 | calcium dependent protein kinase 1 | chr5:1417015-1419877 REVERSE LENGTH=610
NR ref|XP_004981499.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 635 1 635 0.0 324.3 85.7 90.2
Subject 2059 1446 2059
Annot PREDICTED: nuclear pore complex protein NUP1-like [Setaria italica]
IRGSP Os03t0788500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 635 1 635 0.0 94.3 82.4 86.6
Subject 599 1 599
Annot
Sbicolor Sobic.001G063600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 635 1 635 0.0 97.2 84.9 89.8
Subject 617 1 617
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g06550.1.sm.mkhc length: 635 aa.
IPR000719 Protein kinase domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.8e-69 135-393
ProfileScan PS50011 PROTEIN_KINASE_DOM 47.806 135-393
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 5.2e-08 440-468
508-537
545-573
580-608
ProfileScan PS50222 EF_HAND_2 12.254 436-471
515-540
541-576
580-611
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 1.6e-96 135-393
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 255-267
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 7.6e-87 110-420
IPR011992 EF-hand domain pair
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 5.5e-43 517-607
HMMPfam PF13499 EF-hand_7 3e-13 441-533
546-605
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 141-168
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 449-461
518-530
554-566
589-601
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 6.6e-11 135-391
no_ID  
Gene3D G3DSA:1.10.510.10 no description 1.4e-59 233-397
Gene3D G3DSA:3.30.200.20 no description 8.2e-30 130-232
HMMPanther PTHR24349 SERINE/THREONINE-PROTEIN 2e-249 72-607
HMMPanther PTHR24349:SF23 CALCIUM/CALMODULIN-DEPENDENT 2e-249 72-607
Seg seg seg NA 30-47
49-60
75-95
97-113
174-183
superfamily SSF47473 EF-hand 8.8e-41 420-605
Pseudomolecule
Chromosome Start End Strand
116381561643854-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 3198853 3199720 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:1
Zjn_sc00013.1 maker exon 3200059 3200202 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 3200330 3200482 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 3200616 3200731 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 3200930 3201097 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:5
Zjn_sc00013.1 maker exon 3201127 3201453 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:6
Zjn_sc00013.1 maker exon 3201600 3204551 . + . ID=Zjn_sc00013.1.g06550.1.sm.mkhc:exon:7

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