Z. japonica Nagirizaki
Zjn_sc00013.1.g05640.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G07960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 637 1 637 0.0 109.7 69.5 79.7
Subject 699 1 699
Annot | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699
NR ref|XP_002463822.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 637 1 637 0.0 108.3 92 95.4
Subject 690 1 690
Annot hypothetical protein SORBIDRAFT_01g006820 [Sorghum bicolor] gi|241917676|gb|EER90820.1| hypothetical protein SORBIDRAFT_01g006820 [Sorghum bicolor]
IRGSP Os03t0770800-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 637 97 637 0.0 93.6 77.2 80.5
Subject 596 5 596
Annot
Sbicolor Sobic.001G075600.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 637 1 637 0.0 108.6 92 95.4
Subject 692 1 692
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g05640.1.sm.mkhc length: 637 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 5.7e-16 230-432
HMMPanther PTHR32044 FAMILY 0 70-637
HMMPanther PTHR32044:SF0 SUBFAMILY 0 70-637
HMMPfam PF13641 Glyco_tranf_2_3 3.4e-23 231-432
Seg seg seg NA 28-41
44-60
84-99
123-138
375-386
440-454
590-608
superfamily SSF53448 Nucleotide-diphospho-sugar 3.6e-35 227-483
Pseudomolecule
Chromosome Start End Strand
120007622004581+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 2838126 2839272 . - . ID=Zjn_sc00013.1.g05640.1.sm.mkhc:exon:5
Zjn_sc00013.1 maker exon 2840442 2840654 . - . ID=Zjn_sc00013.1.g05640.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 2840691 2840732 . - . ID=Zjn_sc00013.1.g05640.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 2840819 2841127 . - . ID=Zjn_sc00013.1.g05640.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 2841217 2841945 . - . ID=Zjn_sc00013.1.g05640.1.sm.mkhc:exon:1

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