Z. japonica Nagirizaki
Zjn_sc00013.1.g05260.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G27730.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 262 39 258 3e-34 86.6 34.7 47.7
Subject 227 26 219
Annot | Symbols: STZ, ZAT10 | salt tolerance zinc finger | chr1:9648302-9648985 REVERSE LENGTH=227
NR gb|AIN39837.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 262 1 262 e-146 100 98.5 99.2
Subject 262 1 262
Annot hypothetical protein [Zoysia matrella]
IRGSP Os03t0764100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 262 23 259 6e-73 102.7 64.9 69.1
Subject 269 27 267
Annot
Sbicolor Sobic.001G079500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 262 3 262 5e-85 111.1 71 78.6
Subject 291 2 291
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g05260.1.sm.mk length: 262 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 94-114
167-187
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.058 92-119
165-187
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 0.043 92-114
165-187
no_ID  
HMMPanther PTHR26374 FAMILY 4.9e-33 55-250
HMMPanther PTHR26374:SF121SUBFAMILY NOT 4.9e-33 55-250
HMMPfam PF13912 zf-C2H2_6 5.8e-10 92-115
164-188
Seg seg seg NA 23-33
46-58
77-91
119-139
190-219
superfamily SSF57667 C2H2 1.6e-09 90-187
Pseudomolecule
Chromosome Start End Strand
121560252156813+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 2685894 2686682 . - . ID=Zjn_sc00013.1.g05260.1.sm.mk:exon:1

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