Z. japonica Nagirizaki
Zjn_sc00013.1.g04950.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G14810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 11 225 4e-71 128 48.1 58.4
Subject 375 12 222
Annot | Symbols: | semialdehyde dehydrogenase family protein | chr1:5102684-5104633 REVERSE LENGTH=375
NR ref|XP_010943440.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 1 292 e-111 121.2 76.5 87.4
Subject 355 1 355
Annot PREDICTED: probable aspartate-semialdehyde dehydrogenase isoform X2 [Elaeis guineensis]
IRGSP Os03t0760700-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 3 214 1e-90 128 63.5 65.9
Subject 375 4 215
Annot
Sbicolor Sobic.001G081900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 1 214 e-101 128 68.3 71
Subject 375 1 215
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g04950.1.sm.mkhc length: 293 aa.
IPR000534 Semialdehyde dehydrogenase, NAD-binding
method AccNumber shortName E-value location
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01118 Semialdhyde_dh 2.4e-32 40-154
HMMSmart SM00859 Semialdehyde 7.7e-42 39-155
IPR012280 Semialdehyde dehydrogenase, dimerisation domain
Molecular Function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0008652 cellular amino acid biosynthetic process    
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Molecular Function GO:0046983 protein dimerization activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02774 Semialdhyde_dhC 2.3e-09 215-278
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.9e-49 39-175
no_ID  
Gene3D G3DSA:3.30.360.10 no description 1.7e-16 176-214
215-275
HMMPanther PTHR10174 RETINALDEHYDE 3.3e-41 125-214
Seg seg seg NA 119-133
196-204
superfamily SSF51735 NAD(P)-binding 3.4e-50 37-194
superfamily SSF55347 Glyceraldehyde-3-phosphate 9.3e-32 167-287
Pseudomolecule
Chromosome Start End Strand
122784352281316-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 2561391 2561945 . + . ID=Zjn_sc00013.1.g04950.1.sm.mkhc:exon:1
Zjn_sc00013.1 maker exon 2562831 2562917 . + . ID=Zjn_sc00013.1.g04950.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 2563549 2563635 . + . ID=Zjn_sc00013.1.g04950.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 2563845 2563912 . + . ID=Zjn_sc00013.1.g04950.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 2563999 2564272 . + . ID=Zjn_sc00013.1.g04950.1.sm.mkhc:exon:5

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