Z. japonica Nagirizaki
Zjn_sc00013.1.g03730.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G10860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 170 11 170 3e-52 121.2 62.9 77.1
Subject 206 1 206
Annot | Symbols: | Cystathionine beta-synthase (CBS) family protein | chr5:3429173-3430142 REVERSE LENGTH=206
NR gb|AIN39814.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 170 11 170 2e-76 120.6 88.2 90.6
Subject 205 1 205
Annot hypothetical protein [Zoysia matrella]
IRGSP Os03t0737000-03_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 170 10 170 1e-71 121.8 80 88.2
Subject 207 2 207
Annot
Sbicolor Sobic.001G098500.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 170 9 170 6e-71 154.1 80.6 87.6
Subject 262 56 262
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g03730.1.sm.mkhc length: 170 aa.
IPR000644 CBS domain
method AccNumber shortName E-value location
Molecular Function GO:0030554 adenyl nucleotide binding    
HMMPfam PF00571 CBS 0.00051 83-123
123-152
ProfileScan PS51371 CBS 8.632 97-158
no_ID  
Gene3D G3DSA:3.10.580.10 no description 0.00065 81-124
125-153
HMMPanther PTHR11911 INOSINE-5-MONOPHOSPHATE 3e-20 58-170
HMMPanther PTHR11911:SF11 SUBFAMILY 3e-20 58-170
superfamily SSF54631 CBS-domain 4.9e-05 75-123
124-160
Pseudomolecule
Chromosome Start End Strand
128658472868242+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker exon 1974465 1974965 . - . ID=Zjn_sc00013.1.g03730.1.sm.mkhc:exon:4
Zjn_sc00013.1 maker exon 1975740 1975821 . - . ID=Zjn_sc00013.1.g03730.1.sm.mkhc:exon:3
Zjn_sc00013.1 maker exon 1975930 1976193 . - . ID=Zjn_sc00013.1.g03730.1.sm.mkhc:exon:2
Zjn_sc00013.1 maker exon 1976837 1976860 . - . ID=Zjn_sc00013.1.g03730.1.sm.mkhc:exon:1

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