Z. japonica Nagirizaki
Zjn_sc00013.1.g03030.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G37770.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 12 457 0.0 82.6 53.2 63
Subject 469 4 428
Annot | Symbols: ACS8 | 1-amino-cyclopropane-1-carboxylate synthase 8 | chr4:17752222-17753925 FORWARD LENGTH=469
NR gb|ACN25592.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 1 463 0.0 85.4 68.1 71.8
Subject 485 1 451
Annot unknown [Zea mays] gi|414872580|tpg|DAA51137.1| TPA: acc synthase [Zea mays]
IRGSP Os03t0727600-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 1 476 0.0 85.7 70.2 73.9
Subject 487 1 459
Annot
Sbicolor Sobic.001G105900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 568 1 453 0.0 87.5 67.3 70.8
Subject 497 1 441
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00013.1.g03030.1.am.mk length: 568 aa.
IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00105 AA_TRANSFER_CLASS_1 NA 298-311
IPR004839 Aminotransferase, class I/classII
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 9.8e-101 82-453
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 3e-67 112-342
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 2.3e-14 343-459
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.5e-113 11-459
no_ID  
FPrintScan PR00753 ACCSYNTHASE 1.8e-95 72-98
106-122
143-163
165-186
219-243
255-278
292-316
324-347
HMMPanther PTHR11751 SUBGROUP 2.6e-193 14-459
HMMPanther PTHR11751:SF26 ACC 2.6e-193 14-459
Seg seg seg NA 60-70
Pseudomolecule
Chromosome Start End Strand
131832353186920+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00013.1 maker_non_over exon 1655787 1656025 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:6
Zjn_sc00013.1 maker_non_over exon 1657216 1657270 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:5
Zjn_sc00013.1 maker_non_over exon 1657761 1658643 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:4
Zjn_sc00013.1 maker_non_over exon 1658796 1658956 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:3
Zjn_sc00013.1 maker_non_over exon 1659079 1659213 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:2
Zjn_sc00013.1 maker_non_over exon 1659239 1659472 . - . ID=Zjn_sc00013.1.g03030.1.am.mk:exon:1

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